pydeseq2-differential-expression
From the author
Bulk RNA-seq DE with PyDESeq2: load counts, normalize, fit negative binomial models, Wald test (BH-FDR), LFC shrinkage, volcano/MA plots. Use for two-group comparisons, multi-factor designs with batch correction, multiple contrasts.
Install
npx skills add jaechang-hits/SciAgent-Skills --skill pydeseq2-differential-expression -a claude-code
Installs to .claude/skills/pydeseq2-differential-expression/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
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