fastp-fastq-preprocessing
From the author
All-in-one FASTQ QC and adapter trimming. Auto-detects Illumina adapters, filters low-quality reads, corrects paired-end overlaps, emits HTML+JSON QC in one pass. 3-10x faster than Trim Galore/Trimmomatic. First step before STAR, BWA-MEM2, or Salmon.
Install
npx skills add jaechang-hits/SciAgent-Skills --skill fastp-fastq-preprocessing -a claude-code
Installs to .claude/skills/fastp-fastq-preprocessing/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
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