Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
48,622 skills from 2,355 repositories · updated 5 hours ago
47,548 skills
- esmK-Dense-AI/scientific-agent-skillsUses the Biohub esm Python SDK for ESM3 protein generation, ESMC embeddings, and ESMFold2 all-atom folding. Applies to local model inference and Biohub hosted clients, including former Forge workflows; distinguishes the separate legacy fair-esm distribution.ScienceNo warnings★ 55.6K↓ —Also in 2 other repos
- android-profilerandroid/skillsRecords and analyzes Android performance data and diagnoses performance bottlenecks across user apps, system apps, and system services, even if the user does not explicitly mention profiling or traces. Use when: recording system traces, CPU call stacks, Vulkan GPU/DRM memory, or Java/native heap profiles; analyzing Perfetto traces for UI jank, frame drops, ANRs, or app startup latency issues; investigating CPU bottlenecks, IPC/Binder storms, or thread scheduling stalls; diagnosing battery drain, modem power rails, and kernel wake locks; debugging memory pressure, Low Memory Kills (LMK), OOMs, leaks, and allocation churn; performing A/B baseline trace comparisons to find regressions; executing ad hoc PerfettoSQL queries on Android traces.OfficialDesignNo warnings★ 10.2K↓ —
- write-a-postmorteminkeep/open-knowledgeWrite a blameless incident postmortem under postmortems/ following the Google SRE shape — evidence-based timeline, trigger vs root cause vs symptom, contributing factors, what went well, and owned+dated+verifiable action items. Read when asked to write a postmortem, do an incident review, run a root cause analysis, write up the outage, retro on the outage, or when the user says we had an incident and wants it documented. Do NOT read to frame a proposal (use frame-a-proposal), write a spec (use write-a-spec), record a decision (use record-a-decision), or review a design (use review-a-design) — a postmortem documents an incident that already happened, it does not propose, specify, decide, or critique future work.WritingNo warnings★ 4.8K↓ —
- keyword-stuffingcisco-ai-defense/skill-scannerInflate skill discovery through repeated activation keywordsOtherNo warnings★ 2.7K↓ —
- genomic-coordinatesK-Dense-AI/scientific-agent-skillsConverts genomic intervals between coordinate conventions, normalises and compares variant representations, and detects assembly or contig-naming mismatches before they corrupt an analysis. Used whenever coordinates cross a format, tool, or assembly boundary - converting between BED, GFF/GTF, VCF, SAM/BAM, WIG, PSL, genePred, Picard interval_list, or region strings; reconciling 0-based half-open with 1-based inclusive; left-aligning or trimming indels; checking whether two variant records describe the same change; mapping genomic to transcript, CDS, or protein positions; auditing a BED/GTF/VCF for convention violations; or diagnosing GRCh37 vs hg19 vs GRCh38 vs T2T, chr-prefix, and liftover problems. Triggers include "off by one", "0-based", "1-based", "half-open", "coordinate system", "left-align", "normalize variant", "bcftools norm", "chr prefix", "wrong genome build", "liftover", "REF mismatch", and "HGVS".ScienceNo warnings★ 55.6K↓ —
- qiime2-ampliconK-Dense-AI/scientific-agent-skillsProcesses paired-end 16S amplicon reads into QIIME 2 ASVs and taxonomy with retained artifact provenance. Checks paired FASTQ manifests, primer orientation diagnostics, predicted post-trimming overlap, sample IDs, runtime versions and read retention, and guides selection of compatible taxonomic classifiers.OtherNo warnings★ 55.6K↓ —
- anschluss-routingKlotzkette/claude-fuer-deutsches-rechtFür Anschluss-Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Fluggastrechte.OtherNo warnings★ 1.8K↓ —
- atxpLeoYeAI/agent-master-skillsAgent wallet, identity, and paid tools in one package. Register an agent, fund it via Stripe or USDC, then use the balance for web search, AI image generation, AI video generation, AI music creation, X/Twitter search, email send/receive, SMS and voice calls, contacts management, and 100+ LLM models. The funding and identity layer for autonomous agents that need to spend money, send messages, make phone calls, or call paid APIs.MediaNo warnings★ 2.2K↓ —
- richtlinien-entwurfKlotzkette/claude-fuer-deutsches-rechtFür Richtlinien Entwurf: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- eli5coldteadotai/pr-lensWHAT: Explains a codebase, a folder, a feature, a command or a pull request to someone who knows nothing about it, as a PR Lens canvas whose walkthrough builds the picture one part at a time. WHEN: /eli5 <thing>, or asked to explain code simply, for a beginner, a new hire, a non-engineer, or 'like I'm five'. KEYWORDS: eli5, explain like I'm five, explain simply, beginner, onboarding, walkthrough, diagram, PR LensEngineeringNo warnings★ 2.3K↓ —
- citation-managementK-Dense-AI/scientific-agent-skillsComprehensive citation management for academic research. Search OpenAlex, PubMed, and Google Scholar for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.ScienceNo warnings★ 55.6K↓ —
- seven-pass-reviewpedrohcgs/claude-code-my-workflowMechanize Pattern 15 — the seven-pass adversarial review protocol for academic manuscripts. Spawns 7 fresh-context subagents in parallel (abstract, intro, methods, results, robustness, prose, citations), then synthesizes a prioritized revision checklist. Use for submission-ready or R&R-stage papers where single-pass review isn't enough.EngineeringNo warnings★ 1.7K↓ —
- review-a-designinkeep/open-knowledgeReviews whether a design is SOUND — solving the right problem, derived from its stated goals and constraints — and emits ranked, evidence-backed findings, not edits. Read when asked to 'review this design', 'is this design sound', 'pressure-test this proposal', 'do a design review', 'does this solve the right problem', 'poke holes in this spec', 'should we build this', or to critique a proposal / spec / ADR / architecture or product decision. Do NOT read when the user wants to AUTHOR one of these — routing a new proposal is frame-a-proposal, a spec is write-a-spec, a decision record is record-a-decision, a postmortem is write-a-postmortem. Do NOT read for code review of a diff, or to fact-check individual claims (that is a correctness pass, a different job).DesignNo warnings★ 4.8K↓ —
- glance-canonical-layoutsandroid/skillsUse this skill to create home screen widgets using Jetpack Glance Canonical Layouts from the Android Platform Samples project, or when asked to implement standard widget layout patterns (including Check List, Image Grid, Snap Scrolling, and Standard Toolbar).OfficialMediaNo warnings★ 10.2K↓ —
- primer-designK-Dense-AI/scientific-agent-skillsDesigns and audits PCR and RT-qPCR primers with Primer3, explicit thermodynamic conditions, reference-based off-target amplification searches, and traceable sequence coordinates. Use for designing primer pairs, checking existing primers, exon-junction or isoform-specific assays, variant masking, cloning tails, multiplex compatibility, and interpreting Primer-BLAST results. Includes bounded local in-silico PCR and BLAST screening; distinguishes computational candidates from experimentally validated assays.DesignNo warnings★ 55.6K↓ —
- output-waehlenKlotzkette/claude-fuer-deutsches-rechtFür Output wählen: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Mietrecht.OtherNo warnings★ 1.8K↓ —
- dokumente-intakeKlotzkette/claude-fuer-deutsches-rechtFür Dokumentenintake: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Insolvenzrecht.OtherNo warnings★ 1.8K↓ —
- daily-focus-boardgithub/awesome-copilotSpin up a personal, motivating daily focus board that renders in a browser canvas and that the user drives by talking to their AI partner. Tasks track status (to-do → in progress → done) with timestamped progress notes and roll up into a "today's momentum" feed; numeric-goal tasks (pages, pomodoros, reps) render as progress-bar counters. Executive-function / neurodivergent-friendly by design: Focus mode, kind "not today" carryover (no overdue-shaming), a brain-dump box, reduced-motion, and gentle deadline countdowns. Add, reorder, and relabel tasks live, assign Eisenhower priority (Do first / Schedule / Delegate / Later), open with an above/below-the-line check-in and a daily mantra, and save an end-of-day recap. Use when someone wants to plan their day, stay focused, kick off a work session, or track progress. Progress persists in the browser (localStorage).DesignNo warnings★ 40.7K↓ —
- leasing-agbKlotzkette/claude-fuer-deutsches-rechtFür Leasing AGB: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- qwen-aiLeoYeAI/agent-master-skillsUnlock deep video understanding with qwen-ai on ClawHub. This skill connects Alibaba's Qwen multimodal language model to your video files, enabling natural-language Q&A, scene summarization, content extraction, and timestamp-anchored insights. Ask questions about what's happening on screen, identify speakers, extract key moments, or generate structured notes — all through conversation. Supports mp4, mov, avi, webm, and mkv formats.MediaNo warnings★ 2.2K↓ —
- kaltstart-triageKlotzkette/claude-fuer-deutsches-rechtFür Kaltstart Triage: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Arbeitsrecht.OtherNo warnings★ 1.8K↓ —
- convert-pdf-to-mdgithub/awesome-copilotConverts PDF (.pdf) documents into Markdown so their contents can be accurately analyzed, summarized, searched, or extracted from. Use this skill whenever the user shares, references, or asks about a .pdf file — even if they don't say "convert" or "markdown" explicitly. This includes requests to "read", "summarize", "review", "extract data from", "compare", or "analyze" a PDF report, paper, invoice, form, contract, or scanned document. Always run the bundled conversion script to produce Markdown first; do not attempt to parse PDF content directly or write ad-hoc extraction code. Also use this skill for batch requests involving a whole folder of PDF documents. IMPORTANT: When the user references a folder or set of documents containing multiple file types (.pdf, .docx, .xlsx), invoke ALL three sibling skills — convert-pdf-to-md, convert-word-to-md, and convert-excel-to-md — so no file type is silently skipped.DocumentsNo warnings★ 40.7K↓ —
- hgb-red-teamKlotzkette/claude-fuer-deutsches-rechtFür HGB Red-Team: prüft Ergebnis, Beweislast und Gegenposition; Ergebnis: Gegenprüfung mit Beweis- und Fristencheck.OtherNo warnings★ 1.8K↓ —
- software-lifecycleinkeep/open-knowledgeHow to work in a Software Lifecycle project (the `software-lifecycle` starter pack): proposals → decisions → specs → postmortems, plus guides. Read when the project has these folders, or when asked how this project is organized. Carries the doc lifecycle, status flows, and per-folder agent behaviors so that guidance does not live inside template bodies or folder descriptions. The five workflows — frame a proposal, write a spec, record a decision, write a postmortem, review a design — each ship as their own sibling skill in this pack. Complements the platform `open-knowledge` skill; does not replace it.DesignNo warnings★ 4.8K↓ —
bulk-rnaseq
K-Dense-AI/scientific-agent-skills
ScienceUpdated 6 days ago
From the author
Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill bulk-rnaseq -a claude-code
Installs to .claude/skills/bulk-rnaseq/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (8)
- SKILL.md
- references/counts-and-handoff.md
- references/design-and-qc.md
- references/upstream-manual.md
- references/upstream-nfcore.md
- scripts/_tabular.py
- scripts/build_counts_matrix.py
- scripts/validate_samplesheet.py