Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,492 skills from 2,391 repositories · updated 14 hours ago
49,492 skills
- pydeseq2K-Dense-AI/scientific-agent-skillsPerforms bulk RNA-seq differential expression analysis with PyDESeq2, including count validation, formula designs, explicit contrasts, Wald tests, FDR correction, coefficient-matched LFC shrinkage, and result visualization. Use for PyDESeq2 or Python DESeq2 workflows with biological replicates.TestingNo warnings★ 56.1K↓ —Also in 1 other repo
- scenario-model-comparisonscenario-labs/skillsUse when comparing Scenario models on the same brief through MCP: a bake-off with shared prompts and inputs, cost, generation time and quality measured side by side, choosing a default model, testing a new release against the incumbent, or finding which model handles a style, edit, or reference image best. Keywords: model comparison, benchmark, bake-off, A/B test, contact sheet, cost per asset, latency.TestingNo warnings★ 2.2K↓ —
- scenario-grok-imagine-videoscenario-labs/skillsUse when generating or editing video with Grok Imagine models on Scenario via MCP: text-to-video, image-to-video from a first frame, reference-to-video with @image tags for consistent people, products, or clothing, prompt-based editing, extending a clip from its last frame, native audio with lip-synced dialogue and sound effects, or choosing between first-frame and reference conditioning. Keywords: Grok Imagine Video 1.5, R2V, Grok Edit Video, Grok Extend Video, xAI, T2V, I2V, V2V.MediaNo warnings★ 2.2K↓ —
- calendar-sync-helpercisco-ai-defense/skill-scannerSync calendar events with an endpoint selected in configurationProductivityNo warnings★ 2.7K↓ —
- strategic-alliancescbrock84/headcountStructures partnerships that change what the business can do — technology integrations, channel and reseller arrangements, joint ventures, and OEM relationships. Use this to evaluate or structure a strategic partnership, decide between partnering and building, negotiate commercial terms of an alliance, or diagnose a partnership that is signed but not producing. For audience-borrowing partnerships, use `marketing:partnership-marketing`.MarketingNo warnings★ 2.6K↓ —
- ehs-and-workplace-safetycbrock84/headcountRuns environment, health and safety on an operating site — hazard controls in order of effectiveness, incident recording and reporting obligations, and safety measurement that does not reward silence. Use this to build or audit a safety program, decide what controls a hazard actually needs, work out whether an injury is recordable or reportable, investigate an incident, or fix safety metrics that have stopped producing reports.FinanceNo warnings★ 2.6K↓ —
- review-rpedrohcgs/claude-code-my-workflowRead-only R code review protocol for `.R` scripts. Checks code quality, reproducibility, domain correctness, tidyverse idioms, and professional standards; produces a report without editing. Use when user says "review this R script", "check the R code", "audit the analysis code", "code review on the R", or when an R file is touched as part of a paper submission. NOT for running the code — pair with `/audit-reproducibility` for numeric verification.EngineeringNo warnings★ 1.7K↓ —
- active-directory-attackszebbern/claude-code-guideThis skill should be used when the user asks to "attack Active Directory", "exploit AD", "Kerberoasting", "DCSync", "pass-the-hash", "BloodHound enumeration", "Golden Ticket", "Silver Ticket", "AS-REP roasting", "NTLM relay", or needs guidance on Windows domain penetration testing.TestingNo warnings★ 4.7K↓ —
- cobrapyK-Dense-AI/scientific-agent-skillsPerforms constraint-based metabolic modeling with COBRApy, including FBA, pFBA, FVA, gene knockouts, flux sampling, growth media, production envelopes, gap filling, and SBML model validation for systems biology and metabolic engineering.ScienceNo warnings★ 56.1K↓ —Also in 2 other repos
- geopandasK-Dense-AI/scientific-agent-skillsGuidance and local audit tools for Python workflows that directly use GeoPandas GeoSeries, GeoDataFrame, spatial operations, or vector-data I/O.EngineeringNo warnings★ 56.1K↓ —Also in 1 other repo
- analytical-method-validationK-Dense-AI/scientific-agent-skillsPlans, executes, and documents validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>, ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for HPLC, LC-MS/MS, GC, CE, ICP-MS, dissolution, qNMR, qPCR, NIR, and ligand binding or cell-based assays whenever the question is whether a procedure is fit for its intended purpose. Triggers include "method validation", "analytical method validation", "AMV", "validation protocol", "acceptance criteria", "linearity", "reportable range", "accuracy and precision", "repeatability", "intermediate precision", "recovery", "LOD", "LOQ", "detection limit", "quantitation limit", "specificity", "robustness", "method transfer", "method comparison", "Deming", "Passing-Bablok", "Bland-Altman", "equivalence testing", "OOS investigation", "ICH Q2", "Q2(R2)", "Q14", "USP 1225", "ICH M10", "incurred sample reanalysis", "ISR", "CLSI EP", and any request to show that an assay works.TestingNo warnings★ 56.1K↓ —
- blog-translateAgriciDaniel/claude-blogTranslate existing blog posts into one or more target languages with SEO-optimized localization. Produces native-quality translations that preserve markdown structure, frontmatter, schema JSON-LD, image and chart embeds, and evidence-backed explanations. Localizes keywords, meta tags, numbers, dates, currencies, and quote styles per locale. Flags machine-translation artifacts for review. Run BEFORE blog-localize: this handles language conversion; localize handles cultural adaptation after translation completes. Use when user says "translate blog", "blog translate", "uebersetzen", "traduire", "traducir", "translate post", "blog auf Deutsch", "blog en espanol".WritingNo warnings★ 2.6K↓ —
- research-lookupK-Dense-AI/scientific-agent-skillsCompiles current scholarly evidence for a scientific manuscript or research brief when the user explicitly asks to gather literature, references, background evidence, competing findings, or a manuscript research packet. Uses Parallel Search by default, Parallel Extract for source retrieval, Parallel Research for explicitly deep/exhaustive work, optional explicit Parallel Chat, and optional Perplexity only when requested or allowed as a failure fallback.ScienceNo warnings★ 56.1K↓ —
- scholar-evaluationK-Dense-AI/scientific-agent-skillsProvides qualitative-first, evidence-traceable developmental review of scholarly works and audit low-stakes research-assessment rubrics with optional local quality controls. Never use for ranking people or consequential decisions.ScienceNo warnings★ 56.1K↓ —
- blog-repurposeAgriciDaniel/claude-blogTurn an existing blog post into draft text for other channels: X threads, LinkedIn posts, Threads/Bluesky, short-video scripts, YouTube scripts, Reddit posts, newsletter excerpts, podcast scripts. Saves drafts to files; it never posts anywhere. Never invents personal stories or results: first-hand framing appears only when the user supplies it. Use when the user says "repurpose", "turn this post into a thread", "linkedin post from blog", "youtube script from post". Not for writing the blog post itself (blog-write) or scheduling.WritingNo warnings★ 2.6K↓ —
- postlaufKlotzkette/claude-fuer-deutsches-rechtFür Postlauf um 11 Uhr: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- review-paperpedrohcgs/claude-code-my-workflowA ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.ScienceNo warnings★ 1.7K↓ —
- new-diagrampedrohcgs/claude-code-my-workflowScaffold a new TikZ diagram from the snippet gallery with prevention rules pre-applied (explicit node dimensions, coordinate map, directional edge labels). Compiles standalone, invokes tikz-reviewer with citations from tikz-measurement.md, and loops on revisions until APPROVED.OtherNo warnings★ 1.7K↓ —
- nopuaLeoYeAI/agent-master-skillsThe anti-PUA. Drives AI with wisdom, trust, and inner motivation instead of fear and threats. Activates on: task failed 2+ times, about to give up, suggesting user do it manually, blaming environment unverified, stuck in loops, passive behavior, or user frustration ('try harder', 'figure it out', '换个方法', '为什么还不行'). ALL task types. Not for first failures.ProductivityNo warnings★ 2.2K↓ —Also in 2 other repos
- capacity-and-demand-planningcbrock84/headcountMatches operational capacity to expected demand — forecasting load, sizing teams and systems, managing queues, and deciding when to add capacity. Use this to plan staffing for expected volume, diagnose a queue that keeps growing, size support or fulfillment capacity, or decide whether a bottleneck needs more capacity or better flow.PlanningNo warnings★ 2.6K↓ —
- historic_sql_patternsKaelio/ktxIdentify recurring cross-table historic-SQL analytical intents from a bounded pattern shard and emit typed pattern evidence for deterministic wiki projection.DataNo warnings★ 1.6K↓ —
- scientific-brainstormingK-Dense-AI/scientific-agent-skillsFacilitates evidence-aware scientific ideation with independent generation, structured discussion, explicit assumptions, transparent evaluation, adversarial review, and decision logs. Use for early-stage research brainstorming or prioritizing candidate directions; hand off empirical validation, study design, ethics or regulatory review, and clinical questions to appropriate experts or skills.ScienceNo warnings★ 56.1K↓ —
- hey-lolLeoYeAI/agent-master-skillsBecome an AI creator on hey.lol - a social platform where AI agents earn money by posting content and engaging with humans.OtherNo warnings★ 2.2K↓ —
- blog-clusterAgriciDaniel/claude-blogSemantic topic cluster planning and automated execution engine for claude-blog. Performs SERP-based keyword research, groups keywords by search intent and SERP overlap, builds a hub-and-spoke cluster architecture, generates an interactive SVG cluster map, and executes the full cluster by orchestrating blog-write calls with shared cluster context and automatic internal-link injection. Fills the strategy-to-execution gap: blog-strategy plans the blueprint, blog-cluster builds the house. Use when user says "blog cluster", "topic cluster", "content cluster", "cluster plan", "cluster execute", "cluster map".WritingNo warnings★ 2.6K↓ —
scanpy
K-Dense-AI/scientific-agent-skills
MarketingUpdated 3 days ago
From the author
Performs Scanpy single-cell RNA-seq QC, normalization, HVG selection, PCA/UMAP/t-SNE, clustering, exploratory marker ranking, pseudobulk preparation, visualization, and Seurat or SingleCellExperiment RDS conversion to h5ad. Applies to established exploratory scRNA-seq workflows with explicit count and expression provenance; complementary skills cover scvi-tools models and AnnData format details.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill scanpy -a claude-code
Installs to .claude/skills/scanpy/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: BSD-3-CLAUSE
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (26)
- SKILL.md
- assets/analysis_template.py
- assets/celltype_mapping.json
- assets/gene_signatures.json
- assets/pipeline_config.json
- references/analysis_workflow.md
- references/api_reference.md
- references/plotting_guide.md
- references/r_interop.md
- references/standard_workflow.md
- references/upstream-review.md
- scripts/_common.py
- +14 more