Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
48,168 skills from 2,325 repositories · updated 17 hours ago
47,055 skills
- dnanexus-integrationK-Dense-AI/scientific-agent-skillsBuilds and operates reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Supports DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation.ScienceNo warnings★ 55.5K↓ —
- ressort-bmzKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMZ: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- migrate-postgres-tables-to-hypertablestimescale/pg-aiguideUse this skill to migrate identified PostgreSQL tables to Timescale/TimescaleDB hypertables with optimal configuration and validation. **Trigger when user asks to:** - Migrate or convert PostgreSQL tables to hypertables - Execute hypertable migration with minimal downtime - Plan blue-green migration for large tables - Validate hypertable migration success - Configure compression after migration **Prerequisites:** Tables already identified as candidates (use find-hypertable-candidates first if needed) **Keywords:** migrate to hypertable, convert table, Timescale, TimescaleDB, blue-green migration, in-place conversion, create_hypertable, migration validation, compression setup Step-by-step migration planning including: partition column selection, chunk interval calculation, PK/constraint handling, migration execution (in-place vs blue-green), and performance validation queries.DataNo warnings★ 1.9K↓ —
- ressort-bmuknKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMUKN: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- exklusivitaetKlotzkette/claude-fuer-deutsches-rechtFür Exklusivität: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: AGB-Recht-Prüfer. Route: exklusivitaet.OtherNo warnings★ 1.8K↓ —
- google-cloud-solution-multi-agent-securitygoogle/skillsDesigns, deploys, and secures Google Cloud Agent Gateway solutions. Use when the user needs to configure multi-agent security, ingress (CLIENT_TO_AGENT), or egress (AGENT_TO_ANYWHERE) patterns involving Model Armor, IAP, and Agent Registry. Don't use for general Cloud Load Balancing or basic VPC setup not related to Agent Gateways.OfficialSecurityNo warnings★ 21.7K↓ —
- research-lookupK-Dense-AI/scientific-agent-skillsCompiles current scholarly evidence for a scientific manuscript or research brief when the user explicitly asks to gather literature, references, background evidence, competing findings, or a manuscript research packet. Uses Parallel Search by default, Parallel Extract for source retrieval, Parallel Research for explicitly deep/exhaustive work, optional explicit Parallel Chat, and optional Perplexity only when requested or allowed as a failure fallback.ScienceNo warnings★ 55.5K↓ —
- stata-replicationpedrohcgs/claude-code-my-workflowEnd-to-end Stata replication pipeline — scaffolds numbered `.do` files in `scripts/stata/`, executes them via the `stata-mcp` MCP server, captures logs and outputs to `output/`, and produces publication-ready tables (esttab) and figures (graph export). Mirrors `/data-analysis` for R-first projects. Use when user says "stata replication", "set up Stata pipeline", "scaffold the .do files", "run Stata analysis", "AEA replication package in Stata", or when a project's analysis language is Stata not R.DataNo warnings★ 1.7K↓ —
- kaltstart-triageKlotzkette/claude-fuer-deutsches-rechtFür allgemein: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- pathmlK-Dense-AI/scientific-agent-skillsSupports local computational pathology research with PathML: slide loading and tiling, preprocessing and QC, h5path storage, multiplex quantification, spatial graphs, and bounded model inference. Use for whole-slide H&E, CODEX, Vectra, Mesmer, HoVer-Net, and HACTNet workflows.DocumentsNo warnings★ 55.5K↓ —Also in 1 other repo
- dokumente-intakeKlotzkette/claude-fuer-deutsches-rechtFür Dokumentenintake: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: patentrecherche.OtherNo warnings★ 1.8K↓ —
- conversion-trackingcoreyhaines31/marketingskillsSet up, audit, verify, or fix website conversion tracking. Use when the conversion is a form submission, booked meeting, chat, phone call, signup, or purchase; when conversions must reach Google Ads, Meta, GA4, LinkedIn, TikTok, or Microsoft Ads; when the work involves GTM tags and dataLayer events, pixels, the Conversions API (CAPI), Enhanced Conversions, server-side tagging, or gclid and fbclid capture; or when the user reports conversion problems like "conversions stopped", "double counting", "spend but no conversions", "GA4 and Google Ads don't match", or an Unverified or Inactive status. Covers lead gen and ecommerce. Always fire on confirmed success, never the submit click; verify a test conversion arrives; diagnose before changing anything; offer free and native paths alongside paid ones and disclose partner tools. For tracking plans and UTMs, see analytics. For attribution models, see attribution. For campaigns and bidding, see ads. For CRM lead-stage design, see revops.MarketingNo warnings★ 57.6K↓ —
- ressort-bmwsbKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMWSB: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- nwb-conversionK-Dense-AI/scientific-agent-skillsConverts neuroscience acquisition data to Neurodata Without Borders files with NeuroConv and PyNWB, preserves metadata and timebases, checks evidence-based clock alignment, and produces schema validation, NWB Inspector findings and round-trip checks. Use for NWB conversion and synchronization of planar single-channel two-photon TIFF imaging plus timestamped behavioral position CSV; this skill does not perform spike sorting or claim tested support for arbitrary acquisition formats.MarketingNo warnings★ 55.5K↓ —
- autoskillK-Dense-AI/scientific-agent-skillsAnalyzes user-requested Screenpipe history windows to detect repeated research workflows, match existing scientific skills, and stage new skill drafts or composition recipes for review. Requires a reachable Screenpipe HTTP API, normally on localhost:3030. Detection and embedding inference run locally; the selected LLM receives redacted app/title cluster summaries and matched skill descriptions. Use only when the user explicitly asks to analyze their recent work and propose skills.ScienceNo warnings★ 55.5K↓ —Also in 1 other repo
- cirqsickn33/agentic-awesome-skillsCirq is Google Quantum AI's open-source framework for designing, simulating, and running quantum circuits on quantum computers and simulators.OtherNo warnings★ 48.9K↓ —
- epo-quellenkarteKlotzkette/claude-fuer-deutsches-rechtFür Epo Quellenkarte: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- ghbubbuild/bubGitHub CLI skill for interacting with GitHub via the gh command line tool. Use when Bub needs to (1) Create, view, or manage GitHub repositories, (2) Work with issues and pull requests, (3) Create and manage releases, (4) Run and monitor GitHub Actions workflows, (5) Create and manage gists, (6) Install and manage agent skills, or (7) Perform any GitHub operations via command line.DevOpsNo warnings★ 1.7K↓ —
- convert-pdf-to-mdgithub/awesome-copilotConverts PDF (.pdf) documents into Markdown so their contents can be accurately analyzed, summarized, searched, or extracted from. Use this skill whenever the user shares, references, or asks about a .pdf file — even if they don't say "convert" or "markdown" explicitly. This includes requests to "read", "summarize", "review", "extract data from", "compare", or "analyze" a PDF report, paper, invoice, form, contract, or scanned document. Always run the bundled conversion script to produce Markdown first; do not attempt to parse PDF content directly or write ad-hoc extraction code. Also use this skill for batch requests involving a whole folder of PDF documents. IMPORTANT: When the user references a folder or set of documents containing multiple file types (.pdf, .docx, .xlsx), invoke ALL three sibling skills — convert-pdf-to-md, convert-word-to-md, and convert-excel-to-md — so no file type is silently skipped.DocumentsNo warnings★ 40.6K↓ —
- founder-opsJakeschincariol/founder-skillYour operations manager. Works out how the business actually runs on day one: suppliers and what they cost, who works when, the step-by-step routines for opening, serving or shipping and closing, the tools to run it, the licences and permits to check, and a risk register with what to do when each thing goes wrong. Feeds real costs back to the CFO. Use when the user says "how do I run this", "operations", "suppliers", "staffing", "SOPs", "what do I need to open", "permits", or "day one".OtherNo warnings★ 2.3K↓ —
- waypoint-bioK-Dense-AI/scientific-agent-skillsSupports work with Outpost Bio's open microbiome foundation models - the Waypoint checkpoints (Waypoint-6m, Waypoint-45m, Waypoint-170m), the Atlas pretraining corpus, the Compass eight-task benchmark, or the `waypoint` CLI from the `waypoint-bio` package. Covers embedding microbiome samples, fine-tuning on taxonomic abundance data, benchmarking a checkpoint on Compass, pretraining a GPT-2 model on taxonomic abundance profiles, and converting MetaPhlAn, Kraken2, QIIME 2, or MGnify abundance tables into waypoint format.EngineeringNo warnings★ 55.5K↓ —
- juristen-paulusKlotzkette/claude-fuer-deutsches-rechtFür Juristen Paulus: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- cost-accountingcbrock84/headcountEstablishes what something actually costs — fixed, variable and mixed cost behavior, absorption versus variable costing, job-order, process and activity-based methods, breakeven and operating leverage, and price/volume/mix decomposition. Use this to set a price floor, explain why revenue or margin moved, decide make versus buy, judge whether a product line earns its place, or work out how an allocation basis is distorting a reported margin.FinanceNo warnings★ 2.5K↓ —
- dsh-ci-test-reliabilityNewqufei1993/skills-hub设计或审查测试覆盖、选择单元/集成/真实入口/端到端测试及 mock 边界时使用；也用于诊断偶发失败、异步、并行及持有资源的测试。适用于测试计划、回归覆盖缺口和不可靠的 CI 证据。TestingNo warnings★ 1.8K↓ —
pathway-enrichment
K-Dense-AI/scientific-agent-skills
TestingUpdated 6 days ago
From the author
Performs pathway and gene-set enrichment analysis on gene lists or ranked gene data and interprets the results. Used when the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pathways, GO terms, or gene sets are over-represented or enriched. Covers over-representation analysis (ORA / Enrichr / Fisher / hypergeometric), ranked Gene Set Enrichment Analysis (GSEA / preranked), single-sample scoring (ssGSEA/GSVA), and functional profiling via gseapy, g:Profiler, Enrichr libraries, MSigDB, GO, KEGG, Reactome, and WikiPathways — plus gene-ID mapping, choosing the right background universe, multiple-testing correction, redundancy reduction, dotplots/enrichment maps, and publication-ready tables. Use this for "pathway analysis", "enrichment analysis", "GO enrichment", "KEGG/Reactome pathways", "GSEA", "over-representation", "functional annotation", or "what pathways are my genes in".
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill pathway-enrichment -a claude-code
Installs to .claude/skills/pathway-enrichment/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (6)
- SKILL.md
- references/databases-and-gene-sets.md
- references/gseapy.md
- references/interpretation.md
- references/verified-api.md
- scripts/run_enrichment.py