Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,492 skills from 2,391 repositories · updated 13 hours ago
49,492 skills
- matchmsK-Dense-AI/scientific-agent-skillsProcesses, cleans, compares, and searches tandem mass spectra with matchms. Use for MS/MS file I/O, metadata harmonization, peak filtering, spectral similarity, library matching, score matrices, and molecular-similarity networks. Use pyopenms instead for LC-MS feature detection or proteomics pipelines.PlanningNo warnings★ 56.1K↓ —Also in 2 other repos
- knowledge-baseinkeep/open-knowledgeHow to work in a Knowledge Base project (the `knowledge-base` starter pack). Read when the project has the three-layer source-grounded layout — `external-sources/` → `research/` → `articles/` — or when asked how this project is organized. Carries the layer model, per-folder rules, status flows, and log discipline so this guidance does NOT live inside template bodies or log.md. The three procedures live elsewhere: ingest in the platform `open-knowledge` skill, research and consolidate as their own sibling skills in this pack. Complements the platform `open-knowledge` skill; does not replace it.ScienceNo warnings★ 4.8K↓ —
- neonousLeoYeAI/agent-master-skillsOperate the Neonous AI agent platform — create agents, chat, manage tools, run workflows.OtherNo warnings★ 2.2K↓ —
- genimlK-Dense-AI/scientific-agent-skillsSupports audited local Geniml genomic-interval workflows: validate BED and universe contracts, plan Region2Vec or scEmbed runs, inspect model/tokenizer compatibility, and assess consensus universes.ScienceNo warnings★ 56.1K↓ —Also in 2 other repos
- stata-replicationpedrohcgs/claude-code-my-workflowEnd-to-end Stata replication pipeline — scaffolds numbered `.do` files in `scripts/stata/`, executes them via the `stata-mcp` MCP server, captures logs and outputs to `output/`, and produces publication-ready tables (esttab) and figures (graph export). Mirrors `/data-analysis` for R-first projects. Use when user says "stata replication", "set up Stata pipeline", "scaffold the .do files", "run Stata analysis", "AEA replication package in Stata", or when a project's analysis language is Stata not R.DataNo warnings★ 1.7K↓ —
- einstieg-routingKlotzkette/claude-fuer-deutsches-rechtFür Einstieg und Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: robotik-recht.OtherNo warnings★ 1.8K↓ —
- pathmlK-Dense-AI/scientific-agent-skillsSupports local computational pathology research with PathML: slide loading and tiling, preprocessing and QC, h5path storage, multiplex quantification, spatial graphs, and bounded model inference. Use for whole-slide H&E, CODEX, Vectra, Mesmer, HoVer-Net, and HACTNet workflows.DocumentsNo warnings★ 56.1K↓ —Also in 2 other repos
- google-cloud-filestore-auditinggoogle/skillsAudits Filestore instances on Google Cloud across projects for disaster recovery readiness (missing or stale backups), security access governance (overly permissive NFS export rules, 0.0.0.0/0 exposure, missing ROOT_SQUASH), and reliability compliance (Physical Zone Isolation PZI and Physical Zone Separation PZS). Use when assessing storage health posture, auditing NFS export permissions, identifying unprotected file shares, or validating zone failure domains. Don't use for Cloud Storage buckets, Persistent Disk, or NetApp Volumes.OfficialSecurityNo warnings★ 21.9K↓ —
- employee-relationscbrock84/headcountHandles the difficult human situations — grievances, complaints, investigations, conflict, and separations conducted properly. Use this to respond to a complaint or grievance, structure an investigation, handle a conflict between colleagues, prepare for a difficult conversation, or work out what a manager can and cannot do in a given situation.FinanceNo warnings★ 2.6K↓ —
- what-if-oracleK-Dense-AI/scientific-agent-skillsSupports structured what-if scenario analysis for research planning, experimental contingencies, and scientific project decisions. Explores favorable, reference, adverse, wild-card, contrarian, and second-order scenarios with explicit assumptions, evidence, and decision triggers. Use to stress-test a research plan under uncertainty; scenario narratives do not estimate causal effects or calibrated forecast probabilities.TestingNo warnings★ 56.1K↓ —
- exceptio-doliKlotzkette/claude-fuer-deutsches-rechtFür Exceptio Doli: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- untersuchungs-memoKlotzkette/claude-fuer-deutsches-rechtFür Untersuchungs Memo: erstellt Entwurf mit Antrag, Beweis und Anlagen; Ergebnis: Schriftsatz mit Begründungs- und Anlagenlogik.OtherNo warnings★ 1.8K↓ —
- unterlagen-lueckenKlotzkette/claude-fuer-deutsches-rechtFür Unterlagen und Lücken: ordnet Akte, Belege und Lücken; Ergebnis: Dokumentenmatrix mit Nachforderungsliste. Fachgebiet: Prozessrecht.OtherNo warnings★ 1.8K↓ —
- speak-summarygithub/awesome-copilotConvert text, markdown, or a summary produced by another skill into a listenable MP3 using local CPU-only neural text-to-speech. Rewrites written prose for the ear before synthesising. Use when the user asks to "read this out", "turn this into audio", "make an MP3", "I want to listen to this", "podcast version", or wants a spoken digest for a commute or breakfast.ProductivityNo warnings★ 40.8K↓ —
- permission-checkpedrohcgs/claude-code-my-workflowDiagnose why Claude Code is (or isn't) prompting for permission. By default reads only repo-local layers (CLI project, CLI project-local, VSCode workspace). Host-global layers (CLI user `~/.claude/`, VSCode user settings) are read ONLY when the user explicitly confirms — those files may contain unrelated paths or secrets. Use when user says "why is it asking me to approve?", "permission check", "why am I getting prompts?", "bypass isn't working", "check my permissions". Read-only diagnostic.EngineeringNo warnings★ 1.7K↓ —
- dev-implementationcodeaholicguy/ai-devkitAI DevKit · Implementation phase guidance for executing feature plans and checking implementation against design. Use when the user wants to implement planned tasks, update implementation docs, verify code matches design, or run dev-lifecycle phases 5 and 7.DesignNo warnings★ 1.7K↓ —
- convert-excel-to-mdgithub/awesome-copilotConverts Excel (.xlsx) workbooks into Markdown so their contents can be accurately analyzed, summarized, searched, or extracted from. Use this skill whenever the user shares, references, or asks about a .xlsx file — even if they don't say "convert" or "markdown" explicitly. This includes requests to "read", "summarize", "review", "extract data from", "compare", "chart", or "analyze" a spreadsheet, workbook, budget, data export, or tracker. Always run the bundled conversion script to produce Markdown first; do not attempt to parse .xlsx content directly or write ad-hoc extraction code. Also use this skill for batch requests involving a whole folder of Excel workbooks. IMPORTANT: When the user references a folder or set of documents containing multiple file types (.pdf, .docx, .xlsx), invoke ALL three sibling skills — convert-pdf-to-md, convert-word-to-md, and convert-excel-to-md — so no file type is silently skipped.DocumentsNo warnings★ 40.8K↓ —
- gdrive_synthesizeKaelio/ktxSynthesize durable KTX wiki pages from staged Google Drive document pulls. Load when a WorkUnit contains Google Doc raw files from `docs/**`.OtherNo warnings★ 1.6K↓ —
- einstieg-routingKlotzkette/claude-fuer-deutsches-rechtFür Einstieg und Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Insolvenzrecht.OtherNo warnings★ 1.8K↓ —
- data-analysispedrohcgs/claude-code-my-workflowEnd-to-end R data analysis pipeline — exploration → cleaning → regression → publication-ready tables and figures. Use when user says "analyze this dataset", "run a regression on X", "explore this CSV", "full analysis workflow", "get me summary stats and a regression", or points at a `.csv`/`.rds`/`.dta` and asks for empirical results. Produces numbered R scripts in `scripts/R/` and outputs to `output/`.DataNo warnings★ 1.7K↓ —
- ai-seoLeoYeAI/agent-master-skillsWhen the user wants to optimize content for AI search engines, get cited by LLMs, or appear in AI-generated answers. Also use when the user mentions 'AI SEO,' 'AEO,' 'GEO,' 'LLMO,' 'answer engine optimization,' 'generative engine optimization,' 'LLM optimization,' 'AI Overviews,' 'optimize for ChatGPT,' 'optimize for Perplexity,' 'AI citations,' 'AI visibility,' 'zero-click search,' 'how do I show up in AI answers,' 'LLM mentions,' or 'optimize for Claude/Gemini.' Use this whenever someone wants their content to be cited or surfaced by AI assistants and AI search engines. For traditional technical and on-page SEO audits, see seo-audit. For structured data implementation, see schema-markup.MarketingNo warnings★ 2.2K↓ —
- google-cloud-filestore-nfs-browsergoogle/skillsInspects, searches, and reads files and POSIX metadata on Filestore (NFS) instances on Google Cloud without local NFS client packages or root privileges. Use when browsing Filestore shares, searching files, reading remote logs, or inspecting file attributes; don't use for Cloud Storage buckets, Cloud NetApp Volumes, Persistent Disks, or modifying/deleting files.OfficialBrowserNo warnings★ 21.9K↓ —
- vergleichKlotzkette/claude-fuer-deutsches-rechtFür Vergleich: entwickelt Ziel, Vergleich und Eskalation; Ergebnis: Verhandlungs- oder Eskalationslinie.OtherNo warnings★ 1.8K↓ —
- agent-communicationcodeaholicguy/ai-devkitAI DevKit · Exchange information with active Codex, Claude Code, and other AI agents using ai-devkit agent list, detail, and send. Use when an agent needs to find another active agent, read its recent context, send it information, or request information back.EngineeringNo warnings★ 1.7K↓ —
gtars
K-Dense-AI/scientific-agent-skills
ScienceUpdated 3 days ago
From the author
Supports Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill gtars -a claude-code
Installs to .claude/skills/gtars/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (15)
- SKILL.md
- references/cli.md
- references/coverage.md
- references/overlap.md
- references/python-api.md
- references/refget.md
- references/tokenizers.md
- scripts/__init__.py
- scripts/_common.py
- scripts/artifact_inspector.py
- scripts/bed_validator.py
- scripts/coverage_preflight.py
- +3 more