Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,492 skills from 2,391 repositories · updated 11 hours ago
49,492 skills
- anndataK-Dense-AI/scientific-agent-skillsHandles annotated matrices in single-cell analysis, .h5ad and Zarr files, and integration with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.OtherNo warnings★ 56.1K↓ —Also in 2 other repos
- verify-artifactpedrohcgs/claude-code-my-workflowProve that the file you are about to send, publish, or hand off IS the thing you mean — before it leaves your hands. Rebuild from source, check integrity, diff the derived artifact against its source, and require the recipient to echo what they received. Use before sending a paper/PDF for review, shipping a release or replication package, handing files to a coauthor or collaborator, uploading anything to an external reviewer or model, or publishing. Prevents an entire review/QA cycle from being spent on defects that exist only in the artifact, not in the work.TestingNo warnings★ 1.7K↓ —
- replication-packagepedrohcgs/claude-code-my-workflowAssemble a submission-ready replication package to the AEA Data and Code Availability Standard (DCAS) / openICPSR / Social Science Reproduction Platform expectations — standard replication README, dataset manifest, computational-requirements capture, a Table/Figure → script:line map, and a confidential-data deposit plan. Use when user says "build the replication package", "prepare the openICPSR deposit", "make the AEA data and code package", "DCAS compliance", "assemble the deposit for the journal", or after a paper is accepted and the journal's data editor needs the package. NOT a numeric verifier — it calls /audit-reproducibility to confirm claims reproduce before packaging.ScienceNo warnings★ 1.7K↓ —
- capture-environmentpedrohcgs/claude-code-my-workflowSnapshot the computational environment for a replication package — detects the analysis stack (R / Stata / Python) and emits the right lockfiles (renv.lock + sessionInfo.txt, requirements.txt / environment.yml / uv.lock, Stata version + ado package list), records seeds and RNG kind, optionally writes a pinning Dockerfile, and produces a paste-ready "Computational requirements" block. Use when user says "capture the environment", "snapshot my dependencies", "pin the versions", "make a renv.lock / requirements.txt", "make this byte-reproducible", or before releasing a replication package to openICPSR / the AEA Data Editor.WritingNo warnings★ 1.7K↓ —
- discordLeoYeAI/agent-master-skillsUse when you need to control Discord from Clawdbot via the discord tool: send messages, react, post or upload stickers, upload emojis, run polls, manage threads/pins/search, fetch permissions or member/role/channel info, or handle moderation actions in Discord DMs or channels.EngineeringNo warnings★ 2.2K↓ —
- subunternehmerKlotzkette/claude-fuer-deutsches-rechtFür Subunternehmer: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: AGB-Recht-Prüfer. Route: subunternehmer.OtherNo warnings★ 1.8K↓ —
- improve-code-qualitywondelai/skillsGuided journey from a working-but-untested vibe-coded prototype to a production-ready product with tests, clean structure, a business-rules boundary, and resilience at scale. Orchestrates nine skills phase by phase - working-with-legacy-code, clean-code, refactoring-patterns, software-design-philosophy, clean-architecture, pragmatic-programmer, release-it, system-design, ddia-systems - asking the user questions at every decision point and recording results in the project docs/ folder (TESTING.md, TECH-DEBT.md, IMPROVE-CODE-QUALITY-PLAN.md) so the journey resumes across sessions. Use when the user wants to harden an AI-generated prototype, add tests before refactoring, make code safe to change, or says 'this works on my machine but I am scared to touch it'. For an aged codebase, remove-technical-debt; for greenfield structure, design-code-architecture; for a product and UX pass, improve-app; to optimize speed and structure, architecture-optimization. For one framework in isolation, invoke that skill directly.EngineeringNo warnings★ 2.6K↓ —Also in 2 other repos
- open-notebookK-Dense-AI/scientific-agent-skillsOrganizes research with the self-hosted Open Notebook alternative to NotebookLM. Supports source ingestion (PDFs, web pages, audio, video, and Office documents), cited document chat, text and vector search, notes, custom transformations, and multi-speaker podcasts. Use when automating Open Notebook through its REST API or configuring its local or cloud AI providers, including OpenAI, Anthropic, Google, Ollama, Groq, and Mistral.MediaNo warnings★ 56.1K↓ —
- torchdrugK-Dense-AI/scientific-agent-skillsBuilds and troubleshoots TorchDrug 0.2.1 workflows for molecular graphs, property prediction, self-supervised pretraining, molecule generation, retrosynthesis, protein representation learning, and knowledge graph reasoning. Use when code imports torchdrug or needs its datasets, models, tasks, or Engine.ScienceNo warnings★ 56.1K↓ —Also in 1 other repo
- fortbildungKlotzkette/claude-fuer-deutsches-rechtFür Fortbildung: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Berufsrecht Notare.OtherNo warnings★ 1.8K↓ —
- test-gap-auditgithub/awesome-copilotRun a read-only audit for missing, weak, stale, or mis-scoped test coverage. If the user does not name a scope, audit the full repository and identify important code paths, routes, features, services, workflows, and contracts that lack proper tests. If the user names a feature, PR, branch, route, workflow, service, bug fix, API, security-sensitive path, or risky code change, focus only on that specific scope. Use when the user asks what tests are missing, whether coverage is enough, what regression tests to add, or how to prove a change is safe. This is not a general bug audit and not a security review; it evaluates whether behavior is covered by tests.TestingNo warnings★ 40.8K↓ —
- consulting-agbKlotzkette/claude-fuer-deutsches-rechtFür Consulting AGB: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- oracle-reviewpedrohcgs/claude-code-my-workflowA ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.EngineeringNo warnings★ 1.7K↓ —
- cross-borderKlotzkette/claude-fuer-deutsches-rechtFür Cross-Border: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Berufsrecht Notare.OtherNo warnings★ 1.8K↓ —
- citation-managementK-Dense-AI/scientific-agent-skillsComprehensive citation management for academic research. Search OpenAlex, PubMed, and Google Scholar for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.ScienceNo warnings★ 56.1K↓ —
- blog-writeAgriciDaniel/claude-blogWrite a new blog article from scratch for Google rankings and AI citations, then take it through the delivery gates. Generates the full article with template selection, answer-first formatting, Key Takeaways box, sourced statistics, licensed images, built-in SVG charts, optional FAQ and internal linking, in MDX, markdown or HTML. Use when the user asks to write a new blog post or article from a topic or brief ("write a blog post", "draft a new article", "/blog write"). Not for editing an existing post (blog-rewrite), and not for a standalone outline, brief or research request.WritingNo warnings★ 2.6K↓ —
- visual-auditpedrohcgs/claude-code-my-workflowAdversarial visual-layout audit of a Quarto `.qmd` or Beamer `.tex` deck. Flags overflow, font inconsistency, box fatigue, spacing, and alignment issues. Use when user says "visual audit", "check the layout", "does this overflow?", "look for visual issues", "audit the slides", or after reworking a deck's appearance. Does NOT check writing or pedagogy — pair with `/proofread` or `/pedagogy-review`.DocumentsNo warnings★ 1.7K↓ —
- pkedgeLeoYeAI/agent-master-skillsMonitor Polymarket prediction markets, spot mispricings between crowd probabilities and real-world evidence, track whale positioning from the top-50 leaderboard wallets, and detect fresh wallet insider signals. Supports four modes: SCAN (daily digest of flagged markets), DEEP DIVE (full single-market analysis with web search evidence), WHALE WATCH (consensus detection across top trader positions), and INSIDER WATCH (fresh wallet large-position detection).OtherNo warnings★ 2.2K↓ —
- hunt-lfielementalsouls/Claude-BugHunterHunt Local File Inclusion (LFI), Remote File Inclusion (RFI), and Path Traversal — /etc/passwd read, log poisoning → RCE, PHP filter-chain RCE (no upload needed), php:// / data:// / zip:// / phar:// wrappers, RFI via allow_url_include, directory traversal read/write/delete. Covers OOB/blind LFI confirmation and false-positive discipline. Use when hunting file-include or path-traversal bugs on any target.WritingNo warnings★ 5.4K↓ —
- change-and-adoptioncbrock84/headcountGets people to actually use what was delivered — stakeholder analysis, communication, training, resistance, and measuring adoption. Use this to plan a rollout, recover an implementation nobody is using, handle resistance to a change, sequence communications, or work out why a technically successful project changed nothing.PlanningNo warnings★ 2.6K↓ —
- research-ideationpedrohcgs/claude-code-my-workflowGenerate structured research questions, testable hypotheses, and candidate empirical strategies from a topic, phenomenon, or dataset description. Use when user says "give me research ideas on X", "brainstorm questions about Y", "what could I study with this data?", "I'm looking for a paper idea on...", "generate hypotheses for...". One-shot generation, not multi-turn. For idea-refinement use `/interview-me`.ScienceNo warnings★ 1.7K↓ —
- onboardsickn33/agentic-awesome-skillsDecompose mixed project materials (code, docs, PDF/Excel/PPT) into a sourced overview and a goal-driven three-tier learning path, then teach it interactively.DocumentsNo warnings★ 49.1K↓ —
- delikte-furtumKlotzkette/claude-fuer-deutsches-rechtFür Delikte Furtum: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- blog-factcheckAgriciDaniel/claude-blogVerify statistics and claims in blog posts by fetching cited source URLs and checking if the claimed data actually appears on the page. Extracts all load-bearing claims (statistics, product or policy claims, ranking and comparative claims, named sources), validates cited URLs before fetching, and scores match confidence (exact match 1.0, paraphrase 0.7-0.9, not found 0.0). Flags uncited claims as UNVERIFIED and marks a claim verified only when this run fetched the source and found the passage. Checks that a source says what the post says it says; it cannot prove the source is true or verify first-hand experience. Use when the user says "fact check", "verify statistics", "check sources", "factcheck". Report only; not for rewriting posts (blog-rewrite).WritingNo warnings★ 2.6K↓ —
alphagenome
K-Dense-AI/scientific-agent-skills
ScienceUpdated 3 days ago
From the author
Looks up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC, ChIP-TF, ChIP-histone, CAGE, PRO-cap, splicing, polyadenylation and contact-map tracks), scores variants or scans windows on demand with the AlphaGenome model for human and mouse (variant scoring, in silico mutagenesis, REF-versus-ALT track prediction), and builds Atlas website deep links. Use when the user mentions AlphaGenome, AlphaGenome Atlas, AVI or AlphaGenome Variant Impact, DeepMind variant effect prediction, or wants to prioritise or mechanistically interpret non-coding, regulatory, splicing, enhancer, promoter, or chromatin-accessibility effects of SNVs from a VCF, credible set, or region. Research use only; not a clinical tool.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill alphagenome -a claude-code
Installs to .claude/skills/alphagenome/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (8)
- SKILL.md
- references/atlas.md
- references/interpretation.md
- references/model-api.md
- scripts/_common.py
- scripts/atlas_link.py
- scripts/atlas_query.py
- scripts/score_variants.py