Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,492 skills from 2,391 repositories · updated 9 hours ago
49,492 skills
- nature-paper2pptYuan1z0825/nature-skillsCreate or improve a Chinese academic PPTX from a scientific paper or research reading notes, with source figures and speaker notes. Use for 论文做PPT、文献汇报、组会PPT and paper-based conference or defense presentations.DocumentsNo warnings★ 52.2K↓ —
- pennylaneK-Dense-AI/scientific-agent-skillsBuilds and differentiates PennyLane quantum circuits, hybrid PyTorch or JAX models, molecular VQE and QAOA workflows. Use for variational quantum algorithms, quantum machine learning, simulator validation, and moving validated circuits to provider plugins. For hardware-specific compilation use qiskit or cirq; for open-system dynamics use qutip.PlanningNo warnings★ 56.1K↓ —Also in 1 other repo
- sigma_ingestKaelio/ktxExtract durable ktx wiki knowledge from staged Sigma data model specs and workbook summaries. Load for WorkUnits with unitKey sigma-data-models or sigma-workbooks.PlanningNo warnings★ 1.6K↓ —
- paid-advertisingcbrock84/headcountPlans, runs, and optimizes paid acquisition across search, social, and display — account structure, targeting, creative, bidding, budget, and the analysis that says whether to scale or stop. Use this to set up or restructure campaigns, write and iterate ad creative, diagnose rising costs or falling performance, decide budget allocation, or judge whether a channel is working.MarketingNo warnings★ 2.6K↓ —
- qiime2-ampliconK-Dense-AI/scientific-agent-skillsProcesses paired-end 16S amplicon reads into QIIME 2 ASVs and taxonomy with retained artifact provenance. Checks paired FASTQ manifests, primer orientation diagnostics, predicted post-trimming overlap, sample IDs, runtime versions and read retention, and guides selection of compatible taxonomic classifiers.OtherNo warnings★ 56.1K↓ —
- programmatic-seocbrock84/headcountBuilds large sets of search-targeted pages from a template and a dataset — the location, comparison, integration, and use-case pages that capture long-tail demand at scale. Use this when there is a repeating query pattern with real volume, when a dataset could answer many similar searches, or to judge whether a programmatic approach is viable before building it.MarketingNo warnings★ 2.6K↓ —
- pufferlibK-Dense-AI/scientific-agent-skillsVersion-aware guidance for PufferLib reinforcement-learning environments, vectorization, policies, PuffeRL training, evaluation, and safe checkpoint review. Covers the native 5.0 build and environment API, published 3.0.0 Gymnasium/PettingZoo adaptation, and a pinned historical 4.0 profile.EngineeringNo warnings★ 56.1K↓ —Also in 1 other repo
- apigee-agent-gateway-governancegoogle/skillsStands up an Apigee API proxy that a Google Cloud Agent Gateway calls as an ext-proc (Service Extension) callout on an agent's LLM traffic, to meter token usage per model, extract caller identity, and apply Model Armor prompt screening or a semantic cache. Use when wiring Apigee in as an AI gateway behind an Agent Gateway, when an agent's model egress needs governing, or when a callout proxy returns no verdict and you need to find out why. The distinguishing question is whether Apigee forwards the traffic or only inspects it: this skill is inspect-only, and builds the proxy itself. Don't use it when Apigee is meant to receive a request and route it onward to a backend — including hosting an MCP server behind Apigee — which needs a proxy with a target instead. Don't use for governing the agent's calls to tools or MCP servers. Don't use for choosing or switching which model a request goes to. Don't use for creating the Agent Gateway itself, nor for Apigee hybrid.OfficialEngineeringNo warnings★ 21.9K↓ —
- deepspot-mK-Dense-AI/scientific-agent-skillsGenerates transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M. Used for predicted log1p-CPM expression from 224x224 tiles at about 20x, querying the released protein-coding gene panel by symbol, and whole-slide prediction after resolution-aware tiling with histolab.DocumentsNo warnings★ 56.1K↓ —
- reseller-agbKlotzkette/claude-fuer-deutsches-rechtFür Reseller AGB: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- pycalphadK-Dense-AI/scientific-agent-skillsComputes finite-temperature CALPHAD equilibria, phase fractions, and phase compositions from thermodynamic TDB databases using pycalphad. Use for alloy phase stability, equilibrium temperature sweeps, tie lines, lever-rule checks, or reproducible phase-fraction calculations with explicit components and mole-fraction conditions.OtherNo warnings★ 56.1K↓ —Also in 1 other repo
- anschluss-routingKlotzkette/claude-fuer-deutsches-rechtFür Anschluss-Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Prozessrecht.OtherNo warnings★ 1.8K↓ —
- agent-skill-stackgithub/awesome-copilotFind, evaluate, and assemble the smallest compatible set of AI Agent Skills for an end-to-end natural-language goal. Use when a user wants Skills for a multi-step workflow, asks which Skills fit a project, needs an installed-Skill audit or conflict check, has low Skill recall, wants indirect helpers such as humanizers or compliance checks, or wants a project-specific Skill Stack with controlled installation. Search local Skills, registries, GitHub, and OpenCLI; compare adoption, verified fit, safety, and overlap. Do not use for locating one known or common Skill; use the generic find-skills workflow.LegalNo warnings★ 40.8K↓ —
- qutipK-Dense-AI/scientific-agent-skillsSimulate and audit closed and open quantum-system models with QuTiP 5, including deterministic, trajectory, steady-state, spectral, and phase-space workflows. Use for local quantum-dynamics work where physical assumptions, dimensions, and numerical convergence must be explicit.PlanningNo warnings★ 56.1K↓ —Also in 2 other repos
- seedance-food-asmrLearnPrompt/awesome-seedanceCooking close-ups, mukbang and eating vlogs. They work when every beat shows one visible change in the food and one matching sound, and the dish stays the same dish from first frame to last. Use when the user wants a Seedance 2.5 / 2.0 video prompt for this kind of clip (Food close-ups and eating ASMR; 中文触发词: 美食特写与吃播 ASMR, 美食, 吃播, ASMR, 烹饪), or asks how published cases of this type were prompted. Read references/cases.md before drafting.MediaNo warnings★ 2.4K↓ —
- pytdcK-Dense-AI/scientific-agent-skillsProvides Therapeutics Data Commons workflows through PyTDC for registry discovery, dataset access, task-aware splits, evaluator metrics, benchmark groups, and bounded molecular-oracle scoring. Use when working with TDC therapeutic ML datasets or benchmarks.ProductivityNo warnings★ 56.1K↓ —Also in 2 other repos
- huashu-video-checkalchaincyf/huashu-skills基于MrBeast策略检查视频标题、封面和开头钩子。当用户提到"视频标题"、"封面图"、"点击率"、"CTR"、"观看时长"时使用。MediaNo warnings★ 2.2K↓ —
- scenario-caption-studioscenario-labs/skillsUse when a video needs its spoken words on screen through Scenario via MCP: burned-in styled captions for a TikTok, Reels, or Shorts cut, ad captions for sound-off feeds, YouTube subtitles, an SRT sidecar, transcription of a clip's audio, captions translated into another language, karaoke or word-by-word styles, or restyling and correcting an existing transcript. Keywords: captions, subtitles, SRT, transcribe, karaoke, word-by-word, burn in, closed captions, translate video, caption style.MediaNo warnings★ 2.2K↓ —
- skills-validatescenario-labs/skillsUse when explicitly asked to run a live or plan-only application test for a published Scenario skill.TestingNo warnings★ 2.2K↓ —
- bonus-rabattKlotzkette/claude-fuer-deutsches-rechtFür Bonus Rabatt: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- rechtsgeschichteKlotzkette/claude-fuer-deutsches-rechtFür Rechtsgeschichte für Juristen: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- loesungsschemataKlotzkette/claude-fuer-deutsches-rechtFür Lösungsschemata: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- backup-and-recoverycbrock84/headcountProtects and restores data — backup coverage and scope, retention, immutability against ransomware, and proving restores actually work. Use this to design a backup regime, verify restores, plan retention, protect backups from ransomware, or recover from data loss.DesignNo warnings★ 2.6K↓ —
- facilities-and-workplacecbrock84/headcountRuns the physical and hybrid workplace — space planning, leases, health and safety, office services, and the operational side of where people work. Use this to plan space, evaluate a lease or office move, set up a hybrid workplace, handle facilities incidents, or decide what office services are worth funding.PlanningNo warnings★ 2.6K↓ —
pathway-enrichment
K-Dense-AI/scientific-agent-skills
TestingUpdated 3 days ago
From the author
Performs pathway and gene-set enrichment analysis on gene lists or ranked gene data and interprets the results. Used when the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pathways, GO terms, or gene sets are over-represented or enriched. Covers over-representation analysis (ORA / Enrichr / Fisher / hypergeometric), ranked Gene Set Enrichment Analysis (GSEA / preranked), single-sample scoring (ssGSEA/GSVA), and functional profiling via gseapy, g:Profiler, Enrichr libraries, MSigDB, GO, KEGG, Reactome, and WikiPathways — plus gene-ID mapping, choosing the right background universe, multiple-testing correction, redundancy reduction, dotplots/enrichment maps, and publication-ready tables. Use this for "pathway analysis", "enrichment analysis", "GO enrichment", "KEGG/Reactome pathways", "GSEA", "over-representation", "functional annotation", or "what pathways are my genes in".
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill pathway-enrichment -a claude-code
Installs to .claude/skills/pathway-enrichment/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (6)
- SKILL.md
- references/databases-and-gene-sets.md
- references/gseapy.md
- references/interpretation.md
- references/verified-api.md
- scripts/run_enrichment.py