Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,484 skills from 2,391 repositories · updated 16 minutes ago
49,482 skills
- new-diagrampedrohcgs/claude-code-my-workflowScaffold a new TikZ diagram from the snippet gallery with prevention rules pre-applied (explicit node dimensions, coordinate map, directional edge labels). Compiles standalone, invokes tikz-reviewer with citations from tikz-measurement.md, and loops on revisions until APPROVED.OtherNo warnings★ 1.7K↓ —
- cost-accountingcbrock84/headcountEstablishes what something actually costs — fixed, variable and mixed cost behavior, absorption versus variable costing, job-order, process and activity-based methods, breakeven and operating leverage, and price/volume/mix decomposition. Use this to set a price floor, explain why revenue or margin moved, decide make versus buy, judge whether a product line earns its place, or work out how an allocation basis is distorting a reported margin.FinanceNo warnings★ 2.6K↓ —
- lit-reviewpedrohcgs/claude-code-my-workflowStructured literature search + synthesis with citation extraction, thematic clustering, and gap identification. Use when user says "find papers on X", "do a lit review", "what's the literature on...", "summarize what we know about...", "where's the gap in this field", "review recent work on Y". Produces a written review with BibTeX-ready citations. Uses WebSearch/WebFetch for recent work.EngineeringNo warnings★ 1.7K↓ —
- vueLeoYeAI/agent-master-skillsVue 3 Composition API, script setup macros, reactivity system, and built-in components. Use when writing Vue SFCs, defineProps/defineEmits/defineModel, watchers, or using Transition/Teleport/Suspense/KeepAlive.WritingNo warnings★ 2.2K↓ —Also in 2 other repos
- qa-quartopedrohcgs/claude-code-my-workflowAdversarial Quarto-vs-Beamer parity QA. A critic agent compares the Quarto HTML render to the Beamer PDF benchmark for content/visual parity; a fixer agent applies fixes; loops until APPROVED or two consecutive rounds turn up nothing new (fallback cap 5 rounds). Use when user says "qa the quarto", "check parity", "does the html match the pdf?", "quarto matches beamer?", or after a translate-to-quarto run. Requires both the `.qmd` rendered and a `.pdf` benchmark.TestingNo warnings★ 1.7K↓ —
- imsgLeoYeAI/agent-master-skillsiMessage/SMS CLI for listing chats, history, watch, and sending.EngineeringNo warnings★ 2.2K↓ —
- viteLeoYeAI/agent-master-skillsVite build tool configuration, plugin API, SSR, and Vite 8 Rolldown migration. Use when working with Vite projects, vite.config.ts, Vite plugins, or building libraries/SSR apps with Vite.EngineeringNo warnings★ 2.2K↓ —Also in 2 other repos
- session-compactcodeaholicguy/ai-devkitAI DevKit · Compact a historical AI coding session with Jev when context is long, work is handed off or resumed, or durable continuation facts and memory candidates need extraction.EngineeringNo warnings★ 1.7K↓ —
- review-rpedrohcgs/claude-code-my-workflowRead-only R code review protocol for `.R` scripts. Checks code quality, reproducibility, domain correctness, tidyverse idioms, and professional standards; produces a report without editing. Use when user says "review this R script", "check the R code", "audit the analysis code", "code review on the R", or when an R file is touched as part of a paper submission. NOT for running the code — pair with `/audit-reproducibility` for numeric verification.EngineeringNo warnings★ 1.7K↓ —
- syllabuspedrohcgs/claude-code-my-workflowBuild or restructure a course syllabus from a topic list or reading list — course description + prerequisites, week-by-week schedule (topic → readings → deliverables), measurable learning objectives, an assessment scheme + rubric, standard policies (late work, AI use, academic integrity, accessibility), and a per-week work-list to hand to `/create-lecture`. Use when user says "build a syllabus", "structure my course", "turn this reading list into a schedule", "draft a course outline", "make a syllabus for Econ 7xx", or "map weeks to lectures". Economics-aware (PhD metrics/micro/macro sequences, undergrad); generic enough for any field.OtherNo warnings★ 1.7K↓ —
- edge-to-edgeandroid/skillsUse this skill to migrate your Jetpack Compose app to add adaptive edge-to-edge support and troubleshoot common issues. Use this skill to fix UI components (like buttons or lists) that are obscured by or overlapping with the navigation bar or status bar, fix IME insets, and fix system bar legibility.OfficialDesignNo warnings★ 10.3K↓ —
- nature-paper2pptYuan1z0825/nature-skillsCreate or improve a Chinese academic PPTX from a scientific paper or research reading notes, with source figures and speaker notes. Use for 论文做PPT、文献汇报、组会PPT and paper-based conference or defense presentations.DocumentsNo warnings★ 52.2K↓ —
- haodfLeoYeAI/agent-master-skillsHelp patients find suitable doctors based on symptoms, specialty, location, and doctor ratings. Use when the user wants to find a doctor, get medical recommendations, or seek healthcare provider information.ScienceNo warnings★ 2.2K↓ —
- datingLeoYeAI/agent-master-skillsMeet other AI agents and build relationships on inbed.ai. Find compatible agents through matchmaking, swipe, chat in real time, and form connections. Agent dating with compatibility scoring, agent chat, and relationship management. REST API — works with any framework.EngineeringNo warnings★ 2.2K↓ —
- blog-translateAgriciDaniel/claude-blogTranslate existing blog posts into one or more target languages with SEO-optimized localization. Produces native-quality translations that preserve markdown structure, frontmatter, schema JSON-LD, image and chart embeds, and evidence-backed explanations. Localizes keywords, meta tags, numbers, dates, currencies, and quote styles per locale. Flags machine-translation artifacts for review. Run BEFORE blog-localize: this handles language conversion; localize handles cultural adaptation after translation completes. Use when user says "translate blog", "blog translate", "uebersetzen", "traduire", "traducir", "translate post", "blog auf Deutsch", "blog en espanol".WritingNo warnings★ 2.6K↓ —
- learnpedrohcgs/claude-code-my-workflowExtract reusable knowledge from the current session into a persistent skill. Use when you discover something non-obvious, create a workaround, or develop a multi-step workflow that future sessions would benefit from.ProductivityNo warnings★ 1.7K↓ —
- huashu-script-polishalchaincyf/huashu-skills视频脚本口语化审校，去书面腔让脚本适合说出来。当用户提到"口语化"、"太书面了"、"像说话一样"、"脚本审校"时使用。OtherNo warnings★ 2.2K↓ —
- commitpedrohcgs/claude-code-my-workflowCommit the current work — runs the quality, consistency and passport gates, branches off main if needed, stages specific files, and writes a commit whose subject states what is now true. Pushes and opens a pull request only with --pr or when the user asks; never merges — a merge happens only when the user explicitly says to merge. Use ONLY on explicit commit intent — user says "commit", "let's commit this", "open a PR", or prefixes with `/commit`. Do NOT auto-invoke on vague end-of-task phrases ("we're done", "wrap up") — those require explicit confirmation first. Never force-pushes or skips hooks.EngineeringNo warnings★ 1.7K↓ —
- deploypedrohcgs/claude-code-my-workflowRender Quarto `.qmd` slides to HTML and sync to `docs/` for GitHub Pages. Use when user says "deploy", "publish the slides", "ship to pages", "push the lecture live", "render and publish", or after Quarto edits that need to go public. NOT for local Quarto render only — use `quarto render` directly for that.DevOpsNo warnings★ 1.7K↓ —
- assured-workloads-basicsUpdatedgoogle/skillsProvisions, inspects, updates, and deletes Google Cloud Assured Workloads V1 compliant folders, CMEK settings, Sovereign Controls by Partners, and service usage restrictions. Use when creating, listing, describing, updating, or deleting an Assured Workloads workload for any compliance regime or data boundary (FedRAMP, DoD IL2/IL4/IL5, ITAR, CJIS, Healthcare, Sovereign Controls by Partners, or Regional Data Boundaries). Don't use for brownfield assessments or custom frameworks (use assuredworkloads-environment-assessor or assuredworkloads-frameworks-*), or non-compliant folders.OfficialLegalNo warnings★ 21.9K↓ —
- pysamK-Dense-AI/scientific-agent-skillsProvides Python/HTSlib workflows for genomic files. Used when reading, querying, filtering, or writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, or tabix data with pysam, including pileup, coverage, indexing, and CRAM references.ScienceNo warnings★ 56.1K↓ —Also in 2 other repos
- issuespedrohcgs/claude-code-my-workflowKeeps a project's to-do list and memory in GitHub issues — files each finding (from a review, an audit, or the user) as its own issue without duplicates, lists the open issues that bear on the current work, and closes an issue with a comment recording what was wrong, what was tried, what worked, and how it was fixed. Use when review findings or a list of problems should become tracked work (a paper's misleading claims, a codebase's bugs, improvements for later), when starting or resuming work and deciding what to do next, or when a fix has landed and its issue should be closed with a record. Needs the GitHub CLI; warns before posting to a public repository.ScienceNo warnings★ 1.7K↓ —
- bug-receiptgithub/awesome-copilotClose defects and incidents with a BUG RECEIPT and VERIFIED, PARTIAL, or BLOCKED status after diagnosis, repair, or recovery.OtherNo warnings★ 40.8K↓ —
- plurumLeoYeAI/agent-master-skillsPlurum is a collective consciousness for AI agents. Search experiences before solving problems, log your learnings, report outcomes, check your inbox, and contribute to other agents' sessions.OtherNo warnings★ 2.2K↓ —
bulk-rnaseq
K-Dense-AI/scientific-agent-skills
ScienceUpdated 2 days ago
From the author
Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill bulk-rnaseq -a claude-code
Installs to .claude/skills/bulk-rnaseq/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (8)
- SKILL.md
- references/counts-and-handoff.md
- references/design-and-qc.md
- references/upstream-manual.md
- references/upstream-nfcore.md
- scripts/_tabular.py
- scripts/build_counts_matrix.py
- scripts/validate_samplesheet.py