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Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,492 skills from 2,391 repositories · updated 9 hours ago
49,492 skills
- neuropixels-analysisK-Dense-AI/scientific-agent-skillsAnalyzes Neuropixels extracellular recordings end-to-end with SpikeInterface. Covers loading SpikeGLX/Open Ephys/NWB data, preprocessing, drift/motion correction, Kilosort4 (and CPU) spike sorting, quality metrics, and unit curation (threshold-based, model-based UnitRefine, and AI-assisted visual review). Use when working with Neuropixels 1.0/2.0 recordings, spike sorting, or extracellular electrophysiology analysis.EngineeringNo warnings★ 56.1K↓ —
- migrateNewLeoYeAI/agent-master-skillsUse when moving tests from Cypress or Selenium to Playwright ('migrate tests', 'convert tests', 'replace selenium').TestingNo warnings★ 2.2K↓ —
- dokumente-intakeKlotzkette/claude-fuer-deutsches-rechtFür Dokumentenintake: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Produkthaftung und Produktrecht.OtherNo warnings★ 1.8K↓ —
- dnanexus-integrationK-Dense-AI/scientific-agent-skillsBuilds and operates reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Supports DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation.ScienceNo warnings★ 56.1K↓ —
- polarssickn33/agentic-awesome-skillsExpression-based DataFrame library for Python and Rust. Use for eager or lazy tabular analytics, ETL, and pandas migration; streaming support and memory needs depend on the query.DataNo warnings★ 49.1K↓ —
- statistical-powerK-Dense-AI/scientific-agent-skillsCalculates sample sizes and statistical power for study planning. Applies when someone asks "how many subjects/samples/replicates do I need", wants an a priori power analysis, a minimum detectable effect (MDE), a power curve, or needs to justify a sample size for a grant, IRB protocol, or pre-registration. Covers closed-form power for t-tests, ANOVA, proportions, correlations, chi-square, and regression, plus simulation-based (Monte Carlo) power for complex designs — logistic/Poisson regression, mixed models, cluster-randomized trials, survival, and interactions. Also handles requests that only mention an effect size, alpha, or "80% power" without saying "power analysis" explicitly. For laying out the study (randomization, blocking, factorial/DOE, crossover, sequential designs) use experimental-design; for analyzing data already collected and reporting it use statistical-analysis.TestingNo warnings★ 56.1K↓ —
- scikit-survivalK-Dense-AI/scientific-agent-skillsBuilds, evaluates, and audits right-censored or competing-risk survival workflows with scikit-survival, including leakage-safe preprocessing, model selection, probability prediction, and censoring-aware metrics.OtherNo warnings★ 56.1K↓ —
- gogLeoYeAI/agent-master-skillsGoogle Workspace CLI for Gmail, Calendar, Drive, Contacts, Sheets, and Docs.EngineeringNo warnings★ 2.2K↓ —
- 13c-metabolic-fluxK-Dense-AI/scientific-agent-skillsEstimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tracing, mass isotopomer distributions (MDVs/MIDs), positional isotopomers, parallel tracer experiments, and determining whether labeling data constrain a pathway flux. Distinguishes measured-label inference from COBRA flux balance analysis and flags experiments requiring nonstationary MFA.OtherNo warnings★ 56.1K↓ —
- scenario-workflowsscenario-labs/skillsUse when a task involves running a Scenario workflow through MCP, including anything the user calls a Scenario app, a saved pipeline, or a multi-step generation graph. Triggers include listing workflows, building workflow_run's inputs object, pricing a run with a dry run, approving or rejecting a stuck approval node, a run rejected for input length, or a workflows_list reply flooding the context. Creating or editing graphs is scenario-workflow-authoring. Keywords: workflow, app, approval gate.WritingNo warnings★ 2.2K↓ —
- what-if-oracleK-Dense-AI/scientific-agent-skillsSupports structured what-if scenario analysis for research planning, experimental contingencies, and scientific project decisions. Explores favorable, reference, adverse, wild-card, contrarian, and second-order scenarios with explicit assumptions, evidence, and decision triggers. Use to stress-test a research plan under uncertainty; scenario narratives do not estimate causal effects or calibrated forecast probabilities.TestingNo warnings★ 56.1K↓ —
- einstieg-routingKlotzkette/claude-fuer-deutsches-rechtFür Einstieg und Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Produkthaftung und Produktrecht.OtherNo warnings★ 1.8K↓ —
- remote-from-telegramcodeaholicguy/ai-devkitAI DevKit · Connect the current agent session to an available Telegram channel bridge.OtherNo warnings★ 1.7K↓ —
- corporate-governancecbrock84/headcountMaintains the corporate record and the governance machinery — entity records, board and committee support, resolutions and minutes, delegations of authority, insurance, and business continuity. Use this to prepare board or committee materials, record a decision that needs to be minuted, set or check approval authority, review insurance and continuity coverage, establish a retention policy, or work out where a responsibility belongs when it falls between functions.EngineeringNo warnings★ 2.6K↓ —
- grant-proposalpedrohcgs/claude-code-my-workflowScaffold a research grant proposal (NSF, NIH, ERC, or foundation) by composing existing primitives — pulls identification strategy from an `/interview-me` spec, delegates the data-management plan to `/data-management-plan` and the facilities statement to `/capture-environment`, and emits a funder-requirements checklist. Use when user says "draft a grant", "write a proposal", "NSF proposal", "NIH aims", "ERC application", "foundation grant", "specific aims", or "scaffold a grant proposal". NOT a submission tool — produces a draft the user uploads to the sponsor's portal themselves.ScienceNo warnings★ 1.7K↓ —
- fable-methodSahir619/fable-methodA step-by-step problem-solving loop (classify the ask, define done, gather evidence, decide, act surgically, verify by observation, report outcome-first). Use when the user says "/fable-method", "use the fable method", or "approach this like Fable", or proactively when starting any multi-step task that no task-specific skill covers. Subcommands - plan (stop after the plan), audit (grade finished work against the loop), report (rewrite an answer outcome-first).PlanningNo warnings★ 2.3K↓ —
- rechnungKlotzkette/claude-fuer-deutsches-rechtFür Rechnungsvorbereitung und Abschluss: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- chainaiLeoYeAI/agent-master-skillsEthereum & EVM blockchain CLI skill — sign messages, send tokens, swap via 1inch Fusion, check balances, broadcast transactions, and manage wallets across Ethereum and BNB Smart Chain.EngineeringNo warnings★ 2.2K↓ —
- hivemind-goalsactiveloopai/hivemindCreate, track and update team goals via the Deeplake virtual filesystem at memory/goal/. Use whenever the user mentions a goal, objective, target, milestone, or asks to track progress on something measurable. ALSO use when the user says "task", "todo", "work item", "remind me to", "fix X", or any actionable work item — the goal system replaced the legacy `hivemind tasks` CLI and now covers both objectives and tasks.EngineeringNo warnings★ 1.6K↓ —
- scenario-audioscenario-labs/skillsUse when generating or handling audio on Scenario via MCP. Triggers include music tracks, full-length songs with vocals written from lyrics, background scores, soundtracks, game sound effects, SFX, foley, ambience, looping audio, voiceover, narration, speech, TTS, text-to-speech, dialogue, voice cloning, re-voicing a recording, scoring or adding sound to a video, transcription, or requests to create, wait on, play, or download audio files (MP3, WAV) with Scenario tools.MediaNo warnings★ 2.2K↓ —
- quantitative-analysiscbrock84/headcountAnswers a business question with data without fooling yourself — framing the question so an answer would change something, choosing the right comparison, checking the data before trusting it, recognizing the traps that produce confident wrong answers (aggregation reversals, survivorship, regression to the mean, multiple comparisons), and reporting uncertainty honestly. Use this to run an analysis, review one before acting on it, or work out why two people looking at the same data reached opposite conclusions.EngineeringNo warnings★ 2.6K↓ —
- scvi-toolsK-Dense-AI/scientific-agent-skillsFits probabilistic models for single-cell omics, including scVI batch integration, scANVI annotation, totalVI CITE-seq, MultiVI RNA/ATAC integration, and posterior differential expression. Use for generative modeling, reference mapping, multimodal analysis, or model-based uncertainty; use scanpy for standard preprocessing and exploratory analysis.OtherNo warnings★ 56.1K↓ —
- epo-quellenkarteKlotzkette/claude-fuer-deutsches-rechtFür Epo Quellenkarte: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- dsh-ci-test-reliabilityNewqufei1993/skills-hub设计或审查测试覆盖、选择单元/集成/真实入口/端到端测试及 mock 边界时使用；也用于诊断偶发失败、异步、并行及持有资源的测试。适用于测试计划、回归覆盖缺口和不可靠的 CI 证据。TestingNo warnings★ 1.9K↓ —
scvi-tools
K-Dense-AI/scientific-agent-skills
OtherUpdated 3 days ago
From the author
Fits probabilistic models for single-cell omics, including scVI batch integration, scANVI annotation, totalVI CITE-seq, MultiVI RNA/ATAC integration, and posterior differential expression. Use for generative modeling, reference mapping, multimodal analysis, or model-based uncertainty; use scanpy for standard preprocessing and exploratory analysis.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill scvi-tools -a claude-code
Installs to .claude/skills/scvi-tools/ · Each command fetches the skill straight from GitHub with the open skills CLI.
No download: this skill’s licence (Custom or unclear) does not let us redistribute its files. The install commands fetch them from GitHub instead.
What it can touch
Instructions onlyUses the networkLicence: Custom or unclear
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Files (9)
- SKILL.md
- references/differential-expression.md
- references/models-atac-seq.md
- references/models-multimodal.md
- references/models-scrna-seq.md
- references/models-spatial.md
- references/models-specialized.md
- references/theoretical-foundations.md
- references/workflows.md