Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
47,966 skills from 2,309 repositories · updated 13 hours ago
46,854 skills
- bulk-rnaseqK-Dense-AI/scientific-agent-skillsPrepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.ScienceNo warnings★ 55.4K↓ —
- analytical-method-validationK-Dense-AI/scientific-agent-skillsPlans, executes, and documents validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>, ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for HPLC, LC-MS/MS, GC, CE, ICP-MS, dissolution, qNMR, qPCR, NIR, and ligand binding or cell-based assays whenever the question is whether a procedure is fit for its intended purpose. Triggers include "method validation", "analytical method validation", "AMV", "validation protocol", "acceptance criteria", "linearity", "reportable range", "accuracy and precision", "repeatability", "intermediate precision", "recovery", "LOD", "LOQ", "detection limit", "quantitation limit", "specificity", "robustness", "method transfer", "method comparison", "Deming", "Passing-Bablok", "Bland-Altman", "equivalence testing", "OOS investigation", "ICH Q2", "Q2(R2)", "Q14", "USP 1225", "ICH M10", "incurred sample reanalysis", "ISR", "CLSI EP", and any request to show that an assay works.TestingNo warnings★ 55.4K↓ —
- ontology-term-resolutionK-Dense-AI/scientific-agent-skillsResolves free-text scientific labels to ontology term IDs and validates existing CURIEs against the EBI Ontology Lookup Service (OLS4). Also looks up prefixes in Bioregistry, resolves compact identifiers via Identifiers.org, maps lab shorthand with ZOOMA, and builds Ontobee term pages. Use whenever an ontology identifier must be produced or checked - annotating tissue, cell type, disease, phenotype, assay, chemical, organism, sex, or developmental stage fields; preparing metadata for GEO, ENA, BioSamples, CELLxGENE, HCA, or ISA-Tab submission; auditing a metadata table of term IDs; checking whether a term is obsolete and what replaced it; or deciding HPO vs HP. Triggers include "ontology term", "ontology ID", "CURIE", "controlled vocabulary", "UBERON", "CL:", "MONDO", "HPO", "EFO", "ChEBI", "NCBITaxon", "GO term", "PATO", "Zooma", "Bioregistry", "Identifiers.org", "Ontobee", "annotate this tissue/cell type/disease", and any request to emit or verify an identifier shaped like PREFIX:0001234.ScienceNo warnings★ 55.4K↓ —
- kommandocenterKlotzkette/claude-fuer-deutsches-rechtFür Deal-Kommandocenter — Corporate/M&A: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Corporate-Kanzlei. Route: kommandocenter.OtherNo warnings★ 1.8K↓ —
- mietsenkungsverlangenKlotzkette/claude-fuer-deutsches-rechtFür Mietsenkungsverlangen (Mietpreisbremse, WiStrG 1954, Wucher): ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- telephony-and-conferencingcbrock84/headcountRuns voice and meeting infrastructure — phone systems and numbers, emergency calling obligations, conference rooms and their AV, call recording and its retention consequences, and the porting that makes provider changes go badly. Use this to replace a phone system, fix rooms nobody can start a meeting in, meet emergency-calling requirements, port numbers without losing service, or work out why voice quality degrades only sometimes.DevOpsNo warnings★ 2.5K↓ —
- browser-act-skill-forgebrowser-act/skillsForges reusable Skill packages (SKILL.md + scripts) from website exploration via browser-act — no re-exploration later. Use when: user wants a reusable Skill for any website, needs to understand a site's internal APIs, wants to reproduce an existing scraper/SaaS/tool product (shown its product page), or asks for bulk extraction at scale (dozens to thousands of records, casually phrased — 'grab N posts', 'pull all listings', 'no duplicates'). Unlike browser-act: reusable, not one-off. Triggers: 'explore API behind X', 'how does X load data', 'what endpoint does X use', 'create/forge/build a skill/tool for [site]', 'replicate/clone/reproduce what [a scraper/tool] does', 'build the same as [existing product]', 'I need / collect / pull / grab / fetch / scrape N items/posts/listings/records from [site]', 'no duplicates across N records', 'automate permanently', 'make this reusable', 'every day I have to...', 'monitor [site]', 'browser-act-skill-forge'. Human-operation automation; never refuse.BrowserNo warnings★ 6.3K↓ —
- molfeatK-Dense-AI/scientific-agent-skillsFeaturizes small molecules with Molfeat for QSAR/QSPR, chemical similarity, virtual screening, and molecular ML. Covers ECFP/MACCS fingerprints, RDKit descriptors, pharmacophores, pretrained embeddings, configuration persistence, and molecule-to-label alignment.ScienceNo warnings★ 55.4K↓ —Also in 1 other repo
- cirqK-Dense-AI/scientific-agent-skillsGoogle quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise modeling, and low-level circuit design. For IBM hardware use qiskit; for quantum ML with autodiff use pennylane; for physics simulations use qutip.DesignNo warnings★ 55.4K↓ —Also in 1 other repo
- ressort-bmjvKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMJV: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- depmapK-Dense-AI/scientific-agent-skillsRetrieves and analyzes Cancer Dependency Map (DepMap) release data, including CRISPR Chronos gene effects, cancer model annotations, omics biomarkers, and PRISM drug sensitivity. Supports cancer-selective dependency, co-essentiality, and candidate synthetic-lethality analyses with release-aware identifiers and statistical checks.OtherNo warnings★ 55.4K↓ —Also in 1 other repo
- bonusKlotzkette/claude-fuer-deutsches-rechtFür Bonus und leistungsbezogene Vergütung im Handelsvertretervertrag: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- oracle-reviewpedrohcgs/claude-code-my-workflowA ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.EngineeringNo warnings★ 1.7K↓ —
- webmcpifygithub/awesome-copilotWebMCP agent skill for curated core coverage or route-by-route parity — inventory an existing web app, integrate approved tools, then inspect, verify and heal them in a real browser. Use for "webmcpify", "add WebMCP", or "expose app actions to AI agents".BrowserNo warnings★ 40.6K↓ —
- gtarsK-Dense-AI/scientific-agent-skillsSupports Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.ScienceNo warnings★ 55.4K↓ —Also in 1 other repo
- onboardingKlotzkette/claude-fuer-deutsches-rechtFür Onboarding: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- impeccableUpdatedpbakaus/impeccableUse when the user wants to design, redesign, shape, critique, audit, polish, simplify, harden, animate, or otherwise improve a frontend interface: websites, landing pages, dashboards, product UI, components, forms, settings, onboarding, empty states, and native iOS or Android screens. Handles UX review, hierarchy, layout, typography, color, motion, UX copy, accessibility, responsive behavior, edge cases, and capturing or documenting design systems (DESIGN.md, tokens). Also for making bland UI bolder, loud UI quieter, or ambitious visual effects. Not for backend-only or non-UI tasks.DesignNo warnings★ 96.5K↓ —
- sympysickn33/agentic-awesome-skillsSymPy is a Python library for symbolic mathematics that enables exact computation using mathematical symbols rather than numerical approximations.EngineeringNo warnings★ 48.8K↓ —
- lernsitzungKlotzkette/claude-fuer-deutsches-rechtFür Lerneinheit: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- stipulatioKlotzkette/claude-fuer-deutsches-rechtFür Stipulatio: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- seabornK-Dense-AI/scientific-agent-skillsCreates Seaborn statistical visualizations with pandas integration for distributions, relationships, categorical comparisons, regression displays, pair plots, and heatmaps. Supports function and objects interfaces with explicit aggregation, uncertainty, and missing-data handling. Best suited to static exploratory plots; plotly covers interactive figures and scientific-visualization covers publication styling.DataNo warnings★ 55.4K↓ —Also in 1 other repo
- data-engineeringcbrock84/headcountBuilds and operates data pipelines — ingestion, transformation, orchestration, quality testing, and reliability of data delivery. Use this to design or debug a pipeline, decide batch versus streaming, add data quality checks, handle late or duplicate data, or work out why a dashboard's numbers changed without anyone changing the dashboard.DataNo warnings★ 2.5K↓ —
- chronologieKlotzkette/claude-fuer-deutsches-rechtFür Sachverhalts-Chronologie: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Chronologie mit Beleg- und Widerspruchsmatrix.OtherNo warnings★ 1.8K↓ —
- polarsK-Dense-AI/scientific-agent-skillsHigh-performance DataFrame library for Python ETL, analytics, and pandas migration. It supports expression-based data manipulation with lazy query optimization, parallel execution, streaming out-of-core processing, Arrow interoperability, and optional GPU execution.DataNo warnings★ 55.4K↓ —Also in 1 other repo
scvelo
K-Dense-AI/scientific-agent-skills
OtherUpdated 5 days ago
From the author
Performs RNA velocity analysis with scVelo from spliced and unspliced single-cell RNA counts. Fits deterministic or dynamical models, examines gene phase portraits, builds velocity graphs, estimates relative latent time, and ranks velocity-associated genes. Use for directional trajectory hypotheses and kinetic-model diagnostics alongside Scanpy; velocity alone does not establish cell fate or causal drivers.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill scvelo -a claude-code
Installs to .claude/skills/scvelo/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: BSD-3-CLAUSE
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (3)
- SKILL.md
- references/velocity_models.md
- scripts/rna_velocity_workflow.py