Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,399 skills from 2,375 repositories · updated 30 minutes ago
49,399 skills
- ontology-term-resolutionK-Dense-AI/scientific-agent-skillsResolves free-text scientific labels to ontology term IDs and validates existing CURIEs against the EBI Ontology Lookup Service (OLS4). Also looks up prefixes in Bioregistry, resolves compact identifiers via Identifiers.org, maps lab shorthand with ZOOMA, and builds Ontobee term pages. Use whenever an ontology identifier must be produced or checked - annotating tissue, cell type, disease, phenotype, assay, chemical, organism, sex, or developmental stage fields; preparing metadata for GEO, ENA, BioSamples, CELLxGENE, HCA, or ISA-Tab submission; auditing a metadata table of term IDs; checking whether a term is obsolete and what replaced it; or deciding HPO vs HP. Triggers include "ontology term", "ontology ID", "CURIE", "controlled vocabulary", "UBERON", "CL:", "MONDO", "HPO", "EFO", "ChEBI", "NCBITaxon", "GO term", "PATO", "Zooma", "Bioregistry", "Identifiers.org", "Ontobee", "annotate this tissue/cell type/disease", and any request to emit or verify an identifier shaped like PREFIX:0001234.ScienceNo warnings★ 56K↓ —
- exceptio-doliKlotzkette/claude-fuer-deutsches-rechtFür Exceptio Doli: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- paymentLeoYeAI/agent-master-skillsShopping Claw | Give your agent spending power. Financial management for Agents and OpenClaw bots.FinanceNo warnings★ 2.2K↓ —
- founder-opsJakeschincariol/founder-skillYour operations manager. Works out how the business actually runs on day one: suppliers and what they cost, who works when, the step-by-step routines for opening, serving or shipping and closing, the tools to run it, the licences and permits to check, and a risk register with what to do when each thing goes wrong. Feeds real costs back to the CFO. Use when the user says "how do I run this", "operations", "suppliers", "staffing", "SOPs", "what do I need to open", "permits", or "day one".OtherNo warnings★ 2.4K↓ —
- bgb-btog-demenzKlotzkette/claude-fuer-deutsches-rechtFür BGB: Verhandlung, Vergleich und Eskalation: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Betreuungsrecht. Route: bgb-btog-demenz.OtherNo warnings★ 1.8K↓ —
- anschluss-routingKlotzkette/claude-fuer-deutsches-rechtFür Anschluss-Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Prozessrecht.OtherNo warnings★ 1.8K↓ —
- blog-rewriteAgriciDaniel/claude-blogRewrite and optimize existing blog posts for Google SEO (E-E-A-T, helpful content) and AI citation visibility as one SEO discipline. For AI-citation-only audit (no Google work), use blog-geo instead. Replaces fabricated statistics with sourced data, applies answer-first formatting, adds images, generates SVG charts, and updates modified dates only for substantive changes. Works with any blog format (MDX, markdown, HTML). Use when user says "rewrite blog", "optimize blog", "update blog", "improve blog", "fix blog".WritingNo warnings★ 2.6K↓ —
- web-typographywondelai/skillsSelect, pair, and implement typefaces for web projects. Use when the user mentions "font pairing", "which typeface", "line height", "responsive typography", "web font loading", "type hierarchy", "variable fonts", "FOUT/FOIT", "typographic scale", or "the text is hard to read". Also trigger when choosing between system fonts and web fonts, optimizing font-loading performance, or designing readable long-form content. Covers readability evaluation, CSS implementation, and performance optimization. For overall UI design systems, see refactoring-ui. For dramatic typographic experiences, see top-design.DesignNo warnings★ 2.6K↓ —Also in 2 other repos
- bizcardLeoYeAI/agent-master-skillsBusiness card scanner + Google Contacts manager. Auto-detects business card images, extracts contact info via OCR (imageModel), confirms with user, saves to Google Contacts with configurable name format and card photo. Trigger: image that looks like a business card, or keywords "명함", "bizcard", "연락처 저장". Settings: /bizcard configMediaNo warnings★ 2.2K↓ —
- lma-facilityKlotzkette/claude-fuer-deutsches-rechtFür Deal-Kommandocenter — Corporate/M&A: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Corporate-Kanzlei. Route: lma-facility.OtherNo warnings★ 1.8K↓ —
- gpl-agplKlotzkette/claude-fuer-deutsches-rechtFür GPL und AGPL: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- cavemanLeoYeAI/agent-master-skillsUltra-compressed communication mode. Cuts token usage ~75% by speaking like caveman while keeping full technical accuracy. Supports intensity levels: lite, full (default), ultra, wenyan-lite, wenyan-full, wenyan-ultra. Use when user says "caveman mode", "talk like caveman", "use caveman", "less tokens", "be brief", or invokes /caveman. Also auto-triggers when token efficiency is requested.OtherNo warnings★ 2.2K↓ —
- scikit-bioK-Dense-AI/scientific-agent-skillsBiological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.ScienceNo warnings★ 56K↓ —
- mitarbeiterKlotzkette/claude-fuer-deutsches-rechtFür Mitarbeiter: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Berufsrecht Notare.OtherNo warnings★ 1.8K↓ —
- ios-hig-designwondelai/skillsDesign native iOS interfaces following Apple Human Interface Guidelines. Use when the user mentions "iPhone app", "iPad layout", "SwiftUI", "UIKit", "Dynamic Island", "safe areas", "HIG compliance", "SF Symbols", "haptic feedback", "iOS accessibility", "make my app feel native", or "follow Apple design guidelines". Also trigger when building tab bars, navigation stacks, sheets, or modals for iOS, implementing dark mode, or adapting layouts across screen sizes. Covers navigation patterns, accessibility, SF Symbols, and platform conventions. For general UI polish, see refactoring-ui. For affordance design, see design-everyday-things.DesignNo warnings★ 2.6K↓ —Also in 2 other repos
- huashu-article-to-xalchaincyf/huashu-skills长文精简为X平台内容（200-500字），保留核心观点和个人风格。当用户提到"转微博"、"发小红书"、"社交媒体"、"缩短文章"时使用。WritingNo warnings★ 2.2K↓ —
- output-waehlenKlotzkette/claude-fuer-deutsches-rechtFür Output wählen: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Mietrecht.OtherNo warnings★ 1.8K↓ —
- latchshot-page-capturegithub/awesome-copilotUse this skill when a user needs a screenshot, website thumbnail, full-page capture, or PDF of a public HTTP(S) webpage saved as a local artifact through Latchshot, including report, QA, archive, and social-preview workflows. Do not use it for private or authenticated pages, raw HTML, scraping or extraction, arbitrary browser actions, CAPTCHA or anti-bot bypass, or local-file capture.TestingNo warnings★ 40.8K↓ —
- einstieg-routingKlotzkette/claude-fuer-deutsches-rechtFür Einstieg und Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Betreuungsrecht.OtherNo warnings★ 1.8K↓ —
- birdLeoYeAI/agent-master-skillsX/Twitter CLI for reading, searching, and posting via cookies or Sweetistics.EngineeringNo warnings★ 2.2K↓ —
- data-protection-and-encryptioncbrock84/headcountProtects data itself rather than the systems around it — classifying what you hold, encrypting in transit and at rest and understanding what each actually defends against, managing keys and their rotation, handling secrets in applications and pipelines, minimizing and de-identifying, and deleting on purpose. Use this to design data protection for a system, assess an encryption claim, set up key or secret management, or work out what a stolen backup would actually expose.DesignNo warnings★ 2.6K↓ —
- anschluss-routerKlotzkette/claude-fuer-deutsches-rechtFür Produktrecht — Allgemein: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- mem9LeoYeAI/agent-master-skillsPersistent cloud memory for OpenClaw agents. Use when users say: - "install mem9" - "setup memory" - "add memory plugin" - "openclaw memory" - "mem9 onboarding" - "memory not working" - "import memories" - "upload sessions"ProductivityNo warnings★ 2.2K↓ —
- esmK-Dense-AI/scientific-agent-skillsUses the Biohub esm Python SDK for ESM3 protein generation, ESMC embeddings, and ESMFold2 all-atom folding. Applies to local model inference and Biohub hosted clients, including former Forge workflows; distinguishes the separate legacy fair-esm distribution.ScienceNo warnings★ 56K↓ —Also in 2 other repos
pathway-enrichment
K-Dense-AI/scientific-agent-skills
TestingUpdated yesterday
From the author
Performs pathway and gene-set enrichment analysis on gene lists or ranked gene data and interprets the results. Used when the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pathways, GO terms, or gene sets are over-represented or enriched. Covers over-representation analysis (ORA / Enrichr / Fisher / hypergeometric), ranked Gene Set Enrichment Analysis (GSEA / preranked), single-sample scoring (ssGSEA/GSVA), and functional profiling via gseapy, g:Profiler, Enrichr libraries, MSigDB, GO, KEGG, Reactome, and WikiPathways — plus gene-ID mapping, choosing the right background universe, multiple-testing correction, redundancy reduction, dotplots/enrichment maps, and publication-ready tables. Use this for "pathway analysis", "enrichment analysis", "GO enrichment", "KEGG/Reactome pathways", "GSEA", "over-representation", "functional annotation", or "what pathways are my genes in".
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill pathway-enrichment -a claude-code
Installs to .claude/skills/pathway-enrichment/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (6)
- SKILL.md
- references/databases-and-gene-sets.md
- references/gseapy.md
- references/interpretation.md
- references/verified-api.md
- scripts/run_enrichment.py