Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,395 skills from 2,375 repositories · updated 43 minutes ago
49,395 skills
- gsd:check-todosdavepoon/buildwithclaudeList pending todos and select one to work onOtherNo warnings★ 3.7K↓ —
- claude-history-ingestAr9av/obsidian-wikiIngest Claude Code conversation/session history into Obsidian as distilled knowledge. Use for importing or mining past Claude sessions, .claude data, project/session history, or audit logs.EngineeringNo warnings★ 3.7K↓ —
- bulk-rnaseqK-Dense-AI/scientific-agent-skillsPrepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.ScienceNo warnings★ 56K↓ —
- usus-modernusKlotzkette/claude-fuer-deutsches-rechtFür Usus Modernus: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- data-management-planpedrohcgs/claude-code-my-workflowDraft a funder-compliant Data Management Plan (NSF DMP, NIH DMS Policy 2023, ERC, Horizon Europe) by composing the confidential-data and environment-capture primitives. Sections cover data description, formats/metadata, storage/backup, access/sharing, preservation/archiving, and roles. Use when user says "data management plan", "DMP", "DMSP", "NIH data sharing plan", "write the data plan for my grant", or when a grant proposal needs a data-management section. NOT a submission tool — produces a draft the user pastes into the funder portal (DMPTool, NIH ASSIST, Horizon Europe portal).PlanningNo warnings★ 1.7K↓ —
- dokumente-intakeKlotzkette/claude-fuer-deutsches-rechtFür Dokumentenintake: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Meinungsprüfer.OtherNo warnings★ 1.8K↓ —
- einstieg-routingKlotzkette/claude-fuer-deutsches-rechtFür Einstieg und Routing: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Jurastudium.OtherNo warnings★ 1.8K↓ —
- aktenzeichenKlotzkette/claude-fuer-deutsches-rechtFür Aktenzeichen und Verknüpfungen: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- bmlehKlotzkette/claude-fuer-deutsches-rechtFür Legistik-Werkstatt — Allgemein: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- design-code-architecturewondelai/skillsGuided journey from an app idea to a deliberate architecture: boundaries, domain model, data decisions, and resilience, making only the expensive-to-reverse decisions and deferring the rest. Orchestrates eight skills phase by phase - clean-architecture, domain-driven-design, system-design, ddia-systems, software-design-philosophy, release-it, pragmatic-programmer, 37signals-way - asking the user questions at every decision point and recording results in the project docs/ folder (ARCHITECTURE.md, DESIGN-CODE-ARCHITECTURE-PLAN.md) so the journey resumes across sessions. Use when the user wants to design a new app's architecture, choose boundaries and a domain model, decide monolith versus microservices, or says 'how should I structure this app'. If a codebase already exists, use remove-technical-debt (aged), improve-code-quality (fresh prototype), or architecture-optimization (slow but working); if unvalidated, run create-business or create-app first. For one framework in isolation, invoke that skill directly.DesignNo warnings★ 2.6K↓ —Also in 2 other repos
- release-itwondelai/skillsBuild production-ready systems with stability patterns: circuit breakers, bulkheads, timeouts, and retry logic. Use when the user mentions "production outage", "circuit breaker", "deployment pipeline", "chaos engineering", "retry storm", "health checks", "my service keeps crashing", "prevent cascading failures", or "make it resilient". Also trigger when designing resilient microservices, planning zero-downtime deployments, or capacity-planning for peak load. Covers stability patterns, capacity planning, deploy/release decoupling, and observability. For data systems, see ddia-systems. For system architecture, see system-design.DevOpsNo warnings★ 2.6K↓ —Also in 2 other repos
- dokumente-intakeKlotzkette/claude-fuer-deutsches-rechtFür Dokumentenintake: ordnet Akte, Belege und Lücken; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Betreuungsrecht.OtherNo warnings★ 1.8K↓ —
- ressort-bmlehKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMLEH: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- sigma_ingestKaelio/ktxExtract durable ktx wiki knowledge from staged Sigma data model specs and workbook summaries. Load for WorkUnits with unitKey sigma-data-models or sigma-workbooks.PlanningNo warnings★ 1.6K↓ —
- mahnbescheidKlotzkette/claude-fuer-deutsches-rechtFür Mahnverfahren – Paragrafen 688 ff. ZPO: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- ressort-bmiKlotzkette/claude-fuer-deutsches-rechtFür Ressort-Heranführung BMI: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- hooked-uxwondelai/skillsDesign habit-forming product loops using the Hook Model (Trigger, Action, Variable Reward, Investment). Use when the user mentions "users arent coming back", "habit formation", "engagement loops", "habit zone", or "the manipulation matrix". Also trigger when designing notification or re-engagement strategies, building streaks or progress systems, or analyzing why users stop after signup. Covers ethics evaluation and onboarding for habits. For friction reduction and B=MAP, see improve-retention. For viral sharing, see contagious.DesignNo warnings★ 2.6K↓ —Also in 2 other repos
- build-evidence-mapgithub/awesome-copilotBuild an auditable evidence map for a contested technical choice, research synthesis, proposal review, or consequential decision. Use when Copilot must preserve supporting, contradicting, qualifying, and missing evidence with exact source regions instead of collapsing disagreement into prose.ScienceNo warnings★ 40.8K↓ —
- scenario-storyboardsscenario-labs/skillsUse when a story must unfold across a sequence of Scenario images: a comic page or strip, manga or webtoon panels, a children's storybook, a film, game, or ad storyboard, animatic pre-viz frames, or any shot list where the same characters and world must persist from panel to panel and dialogue must stay legible. Keywords: storyboard, comic, panel, sequential art, storybook, shot list, pre-viz, animatic, scene to scene, character consistency.MarketingNo warnings★ 1.9K↓ —
- remote-workKlotzkette/claude-fuer-deutsches-rechtFür Remote Work: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Berufsrecht Notare.OtherNo warnings★ 1.8K↓ —
- scenario-seedreamscenario-labs/skillsUse when generating or editing images with Seedream models on Scenario via MCP: text-to-image, image-to-image editing with reference images, posters or packaging with exact in-image text (non-Latin scripts too), subject-preserving edits, sets of related images in one run, editing a transparent asset without losing its alpha, or splitting an image into transparent PNG layers with Layerize. Keywords: Seedream 5.0 Pro, Lite, Flash, 4.5, Layerize, ByteDance, txt2img, img2img, layer extraction.MediaNo warnings★ 1.9K↓ —
- klageKlotzkette/claude-fuer-deutsches-rechtFür Klage: Mandantenkommunikation und Entscheidungsvorlage: erstellt Entwurf mit Antrag, Beweis und Anlagen; Ergebnis: Schriftsatz mit Begründungs- und Anlagenlogik.OtherNo warnings★ 1.8K↓ —
- excelKlotzkette/claude-fuer-deutsches-rechtFür Excel: Behörden-, Gerichts- oder Registerweg: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.DocumentsNo warnings★ 1.8K↓ —
- wiki_captureKaelio/ktxktx's knowledge base - wiki pages for durable, reusable business knowledge. Covers capture workflow for user preferences, metric definitions, organizational conventions, and cross-references between wiki pages and semantic-layer sources. Loaded by the post-turn memory-agent only. The research agent reads wiki via `wiki_read`/`wiki_search` but does not write it.ScienceNo warnings★ 1.6K↓ —
bulk-rnaseq
K-Dense-AI/scientific-agent-skills
ScienceUpdated yesterday
From the author
Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill bulk-rnaseq -a claude-code
Installs to .claude/skills/bulk-rnaseq/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
Why 89
Security85
Provenance95
Maintenance100
Licence100
Adoption73
Files (8)
- SKILL.md
- references/counts-and-handoff.md
- references/design-and-qc.md
- references/upstream-manual.md
- references/upstream-nfcore.md
- scripts/_tabular.py
- scripts/build_counts_matrix.py
- scripts/validate_samplesheet.py