Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
49,395 skills from 2,375 repositories · updated 4 minutes ago
49,395 skills
- pr-summaryscenario-labs/skillsRefresh the current pull request description from its net changes, following the repository's PR template, when asked to update or write the PR summary. Works in any Scenario repository, whatever its default branch.ProductivityNo warnings★ 1.9K↓ —
- scientific-slidesK-Dense-AI/scientific-agent-skillsBuilds slide decks and presentations for research talks. Used for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design templates, timing guidance, and visual validation. Works with PowerPoint and LaTeX Beamer.DocumentsNo warnings★ 56K↓ —
- treatment-plansK-Dense-AI/scientific-agent-skillsFormats and structurally validates local treatment-plan documentation after clinical decisions have already been supplied and verified by authorized licensed professionals. Use for source traceability, clinician-authored intervention records, goals and checkpoints, shared-decision records, reconciliation handoffs, and release gates—not for clinical decision-making.PlanningNo warnings★ 56K↓ —
- statistical-powerK-Dense-AI/scientific-agent-skillsCalculates sample sizes and statistical power for study planning. Applies when someone asks "how many subjects/samples/replicates do I need", wants an a priori power analysis, a minimum detectable effect (MDE), a power curve, or needs to justify a sample size for a grant, IRB protocol, or pre-registration. Covers closed-form power for t-tests, ANOVA, proportions, correlations, chi-square, and regression, plus simulation-based (Monte Carlo) power for complex designs — logistic/Poisson regression, mixed models, cluster-randomized trials, survival, and interactions. Also handles requests that only mention an effect size, alpha, or "80% power" without saying "power analysis" explicitly. For laying out the study (randomization, blocking, factorial/DOE, crossover, sequential designs) use experimental-design; for analyzing data already collected and reporting it use statistical-analysis.TestingNo warnings★ 56K↓ —
- 13c-metabolic-fluxK-Dense-AI/scientific-agent-skillsEstimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tracing, mass isotopomer distributions (MDVs/MIDs), positional isotopomers, parallel tracer experiments, and determining whether labeling data constrain a pathway flux. Distinguishes measured-label inference from COBRA flux balance analysis and flags experiments requiring nonstationary MFA.OtherNo warnings★ 56K↓ —
- zxLeoYeAI/agent-master-skillsComprehensive guide for writing shell scripts with Google zx — a tool for writing better scripts using JavaScript/TypeScript. Use when writing, debugging, or refactoring zx scripts (.mjs, .js, .ts files using zx), executing shell commands from JavaScript, working with ProcessPromise/ProcessOutput APIs, piping streams, configuring zx options, or using zx CLI. Do NOT use for general Node.js questions unrelated to shell scripting.WritingNo warnings★ 2.2K↓ —
- pathway-enrichmentK-Dense-AI/scientific-agent-skillsPerforms pathway and gene-set enrichment analysis on gene lists or ranked gene data and interprets the results. Used when the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pathways, GO terms, or gene sets are over-represented or enriched. Covers over-representation analysis (ORA / Enrichr / Fisher / hypergeometric), ranked Gene Set Enrichment Analysis (GSEA / preranked), single-sample scoring (ssGSEA/GSVA), and functional profiling via gseapy, g:Profiler, Enrichr libraries, MSigDB, GO, KEGG, Reactome, and WikiPathways — plus gene-ID mapping, choosing the right background universe, multiple-testing correction, redundancy reduction, dotplots/enrichment maps, and publication-ready tables. Use this for "pathway analysis", "enrichment analysis", "GO enrichment", "KEGG/Reactome pathways", "GSEA", "over-representation", "functional annotation", or "what pathways are my genes in".TestingNo warnings★ 56K↓ —
- okrs-kanzleiKlotzkette/claude-fuer-deutsches-rechtFür OKR und Prioritäten: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- anschluss-routerKlotzkette/claude-fuer-deutsches-rechtFür Jurastudium — Allgemein: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- kaltstart-triageKlotzkette/claude-fuer-deutsches-rechtFür Meinungsprüfer - Allgemein: routet Rolle, Frist, Unterlagen und Fachschritt; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- geomasterK-Dense-AI/scientific-agent-skillsSupports geospatial research workflows for remote sensing, vector and raster GIS, spatial statistics, terrain and network analysis, and machine learning for Earth observation. Use when processing satellite imagery, aligning coordinate systems and raster grids, accessing STAC catalogs, analyzing geospatial time series, or implementing scientific GIS workflows in Python, R, Julia, JavaScript, C++, Java, Go, or Rust.ScienceNo warnings★ 56K↓ —Also in 1 other repo
- pyhealthK-Dense-AI/scientific-agent-skillsBuilds and validates PyHealth clinical machine-learning pipelines for EHR, signals, imaging, and medical codes. Use for PyHealth dataset loading, MIMIC-III/IV, eICU or OMOP prediction tasks, patient-level evaluation, mortality/readmission/length-of-stay modeling, medication recommendation, sleep staging, Trainer checkpoints, and ICD/ATC/NDC/RxNorm mapping.ScienceNo warnings★ 56K↓ —Also in 1 other repo
- mex-relaymex-memory/mexPrepare and manage durable MEX team handoffs. Use when the user asks to hand work to a person or team, prepare an end-of-session handoff, save what the next engineer needs, create a MEX Relay, take or close a Relay, or explicitly invokes /mex-relay or $mex-relay. Treat Relay as a memory and context baton, not chat, notifications, task assignment, issue tracking, or a Jira replacement; do not activate for ordinary status messages that are not durable handoffs.ProductivityNo warnings★ 1.8K↓ —Also in 1 other repo
- output-waehlenKlotzkette/claude-fuer-deutsches-rechtFür Output wählen: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Insolvenzrecht.OtherNo warnings★ 1.8K↓ —
- widerspruchKlotzkette/claude-fuer-deutsches-rechtFür Fahrgastrechte-Widerspruch — Skill: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.OtherNo warnings★ 1.8K↓ —
- torchdrugK-Dense-AI/scientific-agent-skillsBuilds and troubleshoots TorchDrug 0.2.1 workflows for molecular graphs, property prediction, self-supervised pretraining, molecule generation, retrosynthesis, protein representation learning, and knowledge graph reasoning. Use when code imports torchdrug or needs its datasets, models, tasks, or Engine.ScienceNo warnings★ 56K↓ —Also in 1 other repo
- team-topologieswondelai/skillsOrganize business and technology teams for fast flow using Skelton & Pais's "Team Topologies". Use when the user mentions "team topologies", "Conway's law", "platform team", "stream-aligned team", "team boundaries", "cognitive load", "how should we split teams", "who owns this service", "team dependencies", or "reorg". Also trigger when reorganizing engineering teams, aligning team and service boundaries, splitting a monolith and deciding ownership, reducing cross-team handoffs, or designing an internal platform. Covers the four team types, three interaction modes, the inverse Conway maneuver, and fracture planes. For bounded contexts, see domain-driven-design. For dependency direction in code, see clean-architecture.DesignNo warnings★ 2.6K↓ —Also in 2 other repos
- pua-enLeoYeAI/agent-master-skillsForces exhaustive problem-solving with corporate PUA rhetoric. Trigger on: task failed 2+ times, about to give up, suggesting user do it manually, blaming environment unverified, stuck in loops, passive behavior, or user frustration ('try harder', 'figure it out', 'stop giving up', 'why isn't this working', 'again???'). ALL task types. Not for first failures.ProductivityNo warnings★ 2.2K↓ —
- output-waehlenKlotzkette/claude-fuer-deutsches-rechtFür Output wählen: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Betreuungsrecht.OtherNo warnings★ 1.8K↓ —
- admapixLeoYeAI/agent-master-skillsAd intelligence & app analytics assistant. Search ad creatives, analyze apps, view rankings, track downloads/revenue, and get market insights. Get your API key at https://www.admapix.com. Triggers: 找素材, 搜广告, 广告素材, 竞品分析, 广告分析, 排行榜, 下载量, 收入分析, 市场分析, 投放分析, App分析, 出海分析, search ads, find creatives, ad spy, ad analysis, app ranking, download data, revenue, market analysis, app intelligence, competitor analysis, ad distribution.DataNo warnings★ 2.2K↓ —
- omero-integrationK-Dense-AI/scientific-agent-skillsInspects and automates microscopy data workflows against OMERO.server with omero-py, BlitzGateway, OMERO CLI, tables, annotations, ROIs, rendering, and documented OMERO.web APIs. Use this skill for scoped OMERO inventory, metadata export, import/export planning, or reviewed write workflows.MediaNo warnings★ 56K↓ —
- steps-plan-pmoKlotzkette/claude-fuer-deutsches-rechtFür Steps Plan und Deal-PMO: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.PlanningNo warnings★ 1.8K↓ —
- false-friendsKlotzkette/claude-fuer-deutsches-rechtFür Mandantenkommunikation: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt. Fachgebiet: Common-Law-Kompass für deutsche Wirtschaftsjuristen.LegalNo warnings★ 1.8K↓ —
- canvasLeoYeAI/agent-master-skillsDisplay HTML content on connected OpenClaw nodes (Mac app, iOS, Android).OtherNo warnings★ 2.2K↓ —
pysam
K-Dense-AI/scientific-agent-skills
ScienceUpdated yesterday
From the author
Provides Python/HTSlib workflows for genomic files. Used when reading, querying, filtering, or writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, or tabix data with pysam, including pileup, coverage, indexing, and CRAM references.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill pysam -a claude-code
Installs to .claude/skills/pysam/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Download .zip
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
What it can touch
Runs bundled scriptsUses the networkLicence: MIT
Safety checks on SKILL.md
- Ships scripts we have not reviewedLow
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Files (14)
- SKILL.md
- references/alignment_files.md
- references/api_reference.md
- references/common_workflows.md
- references/coordinates_and_indexing.md
- references/cram_and_performance.md
- references/migration_to_0_24.md
- references/sequence_files.md
- references/sources.md
- references/variant_files.md
- scripts/alignment_qc.py
- scripts/filter_alignments.py
- +2 more