Agent skills you can check before you install
Public SKILL.md skills from GitHub repositories with 50+ stars and from the vendors themselves, scanned and scored. Install any of them with one command in Claude Code, Cursor, Codex, GitHub Copilot or Gemini CLI.
9,277 skills from 267 repositories · updated 3 minutes ago
630 skills
- nature-paper-transYuan1z0825/nature-skills将英文论文 PDF 的指定页面或全文逐页翻译为简体中文图片型 PDF，尽量保留原文的版式、分栏、图表和公式；最终仅交付中文 PDF。用于论文阅读翻译，不用于可编辑 Word 重建或逐字审校。ScienceNo warnings★ 49.8K↓ —
- diffdockK-Dense-AI/scientific-agent-skillsPredicts protein-small-molecule binding poses with DiffDock and DiffDock-L from PDB or sequence plus SMILES/SDF/MOL2. Covers batch docking, pose triage, confidence interpretation, and validation. Use for molecular docking and virtual-screening pose generation, not binding-affinity prediction.ScienceNo warnings★ 53.4K↓ —
- nature-academic-searchYuan1z0825/nature-skillsSearch literature across sources, verify or manage citations, and build MeSH strategies or citation-impact audits. Use for 文献检索、引文核对、参考文献管理、严格他引 and evidence-backed citer profiles; not for translating a paper or drafting manuscript prose.ScienceNo warnings★ 49.8K↓ —
- nature-paper-to-patentYuan1z0825/nature-skillsTurn research papers or inventor materials into evidence-grounded Chinese invention patent drafts and technical disclosures. Use for 技术交底书、专利撰写、现有技术对比 and Chinese DOCX patent packages; not general manuscript writing.ScienceNo warnings★ 49.8K↓ —
- researchwriteYuan1z0825/nature-skillsCompose, revise, or audit research proposals, opening reports, and research plans from supporting evidence. Use for 研究计划、开题报告、科研项目申请书. Invoked as researchwrite for compatibility; use nature-writing for general manuscript sections.ScienceNo warnings★ 49.8K↓ —
- deepchemK-Dense-AI/scientific-agent-skillsBuilds molecular property prediction and MoleculeNet workflows with DeepChem, including SMILES featurization, scaffold or grouped holdouts, masked labels, graph models and explicit pretrained encoder transfer. Used for ADMET, toxicity, solubility and chemistry ML when DeepChem data/model contracts and scientific validation are needed.ScienceNo warnings★ 53.4K↓ —
- scientific-visualizationK-Dense-AI/scientific-agent-skillsCreates and audits truthful, accessible, publication-ready scientific figures with Matplotlib, Seaborn, or Plotly. Use it for figure design, multi-panel layouts, uncertainty and missing-data displays, color/contrast review, image metadata validation, and journal export planning.ScienceNo warnings★ 53.4K↓ —
- using-lwcsickn33/agentic-awesome-skillsUse when project decisions, code structure, research, incidents, or verified context must survive future coding-agent sessions through LWC memory and graph indexes.ScienceNo warnings★ 48.2K↓ —
- molfeatK-Dense-AI/scientific-agent-skillsFeaturizes small molecules with Molfeat for QSAR/QSPR, chemical similarity, virtual screening, and molecular ML. Covers ECFP/MACCS fingerprints, RDKit descriptors, pharmacophores, pretrained embeddings, configuration persistence, and molecule-to-label alignment.ScienceNo warnings★ 53.4K↓ —
- lamindbK-Dense-AI/scientific-agent-skillsManages biological datasets and models with LaminDB, including artifact registration, lineage tracking, schema validation, Bionty ontology annotation, query/search, collections, branches, storage, and workflow integrations. Use for reproducible biological data curation or a LaminDB lakehouse.ScienceNo warnings★ 53.4K↓ —
- hypothesis-generationK-Dense-AI/scientific-agent-skillsFormulates evidence-bounded scientific questions, candidate hypotheses, rival explanations, causal or associational claims, discriminating predictions, measurements, and preregistration-ready analysis plans. Used when turning observations or preliminary findings into transparent, testable research plans without treating hypotheses as facts.ScienceNo warnings★ 53.4K↓ —
- cobrapyK-Dense-AI/scientific-agent-skillsPerforms constraint-based metabolic modeling with COBRApy, including FBA, pFBA, FVA, gene knockouts, flux sampling, growth media, production envelopes, gap filling, and SBML model validation for systems biology and metabolic engineering.ScienceNo warnings★ 53.4K↓ —
- canteraK-Dense-AI/scientific-agent-skillsRuns Cantera homogeneous chemical reactors and evaluates ignition delay with mechanism provenance, conservation checks, and numerical refinement. Use for combustion kinetics, closed adiabatic ideal-gas constant-volume or constant-pressure ignition, temperature histories, or mechanism-specific ignition-delay comparisons.ScienceNo warnings★ 53.4K↓ —
- genimlK-Dense-AI/scientific-agent-skillsSupports audited local Geniml genomic-interval workflows: validate BED and universe contracts, plan Region2Vec or scEmbed runs, inspect model/tokenizer compatibility, and assess consensus universes.ScienceNo warnings★ 53.4K↓ —
- sympyK-Dense-AI/scientific-agent-skillsPerforms exact symbolic mathematics with SymPy for algebra, calculus, equation solving, symbolic linear algebra, physics, and lambdify or LaTeX code generation. Use when a task needs symbolic results, explicit assumptions, or exact arithmetic; use NumPy or SciPy for purely numerical workloads.ScienceNo warnings★ 53.4K↓ —
- build-evidence-mapgithub/awesome-copilotBuild an auditable evidence map for a contested technical choice, research synthesis, proposal review, or consequential decision. Use when Copilot must preserve supporting, contradicting, qualifying, and missing evidence with exact source regions instead of collapsing disagreement into prose.ScienceNo warnings★ 40.3K↓ —
- pysamK-Dense-AI/scientific-agent-skillsProvides Python/HTSlib workflows for genomic files. Used when reading, querying, filtering, or writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, or tabix data with pysam, including pileup, coverage, indexing, and CRAM references.ScienceNo warnings★ 53.4K↓ —
- gtarsK-Dense-AI/scientific-agent-skillsSupports Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.ScienceNo warnings★ 53.4K↓ —
- arborK-Dense-AI/scientific-agent-skillsApplies Arbor Hypothesis Tree Refinement to research artifacts with repeatable evaluators, including model training, agent harnesses, data synthesis and benchmark optimization. Uses persistent hypotheses, isolated experiments, evidence propagation and held-out candidate comparison for multi-experiment research runs. Includes a standard-library state manager and guidance for the RUC-NLPIR Arbor CLI.ScienceNo warnings★ 53.4K↓ —
- esmK-Dense-AI/scientific-agent-skillsUses the Biohub esm Python SDK for ESM3 protein generation, ESMC embeddings, and ESMFold2 all-atom folding. Applies to local model inference and Biohub hosted clients, including former Forge workflows; distinguishes the separate legacy fair-esm distribution.ScienceNo warnings★ 53.4K↓ —
- scikit-bioK-Dense-AI/scientific-agent-skillsBiological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.ScienceNo warnings★ 53.4K↓ —
- auto-empirical-research-skillsbrycewang-stanford/Auto-Empirical-Research-SkillsRoute empirical-research requests through the Auto-Empirical Research Skills catalog when this whole repository is installed as one skill in Codex, CodeBuddy, Claude Code, or another IDE. Use to choose and load the right vendored AERS skill for causal inference, econometrics, replication, data acquisition, manuscript writing, peer review and referee responses, citation checking, de-AIGC editing, or full empirical-paper workflows, or an end-to-end run from raw data all the way to a finished Word (.docx) manuscript, without reading the entire repository at once.ScienceNo warnings★ 4.7K↓ —
- knowledge-baseinkeep/open-knowledgeHow to work in a Knowledge Base project (the `knowledge-base` starter pack). Read when the project has the three-layer source-grounded layout — `external-sources/` → `research/` → `articles/` — or when asked how this project is organized. Carries the layer model, per-folder rules, status flows, and log discipline so this guidance does NOT live inside template bodies or log.md. The three procedures live elsewhere: ingest in the platform `open-knowledge` skill, research and consolidate as their own sibling skills in this pack. Complements the platform `open-knowledge` skill; does not replace it.ScienceNo warnings★ 4.6K↓ —
- research-with-sourcesinkeep/open-knowledgeInvestigate a topic against preserved sources and write a draft-status research article under `research/` in a Knowledge Base project (the `knowledge-base` starter pack). Read when asked to research a topic, compare options, synthesize sources, gather evidence, or extend an existing research doc. Carries the full procedure: scan existing coverage, agree a research rubric, capture every source verbatim before analyzing, write the article incrementally so a crash never loses work, cite every claim, and link it back into the graph. Does not promote findings to canonical knowledge — that is the sibling `consolidate-notes` skill, after a decision lands.ScienceNo warnings★ 4.6K↓ —