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Builds and deploys bioinformatics pipelines on the LatchBio platform using the Latch SDK — author workflows with @workflow/@task decorators, handle LatchFile/LatchDir I/O, register serverless workflows, configure CPU/GPU task resources, organize data in the Latch Registry, and wrap Nextflow/Snakemake pipelines. Use when developing or deploying a Latch SDK workflow, sizing task resources, working with the Registry, or porting a Nextflow/Snakemake bioinformatics pipeline onto LatchBio. Not for DNAnexus (dxpy/dx CLI) or generic Flyte. Part of the AlterLab Academic Skills suite.

Install

npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-latchbio -a claude-code

Installs to .claude/skills/alterlab-latchbio/ · Each command fetches the skill straight from GitHub with the open skills CLI.

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