alterlab-etetoolkit
From the author
Manipulate, annotate, and render phylogenetic trees programmatically with the ETE Toolkit (ete3) — parse and edit Newick/NHX, detect duplication/speciation events, infer orthology and paralogy, query NCBI taxonomy, and export PDF/SVG figures. Use when traversing or reformatting tree files, doing phylogenomic comparative analysis, or producing publication tree graphics in Python. Part of the AlterLab Academic Skills suite.
Install
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-etetoolkit -a claude-code
Installs to .claude/skills/alterlab-etetoolkit/ · Each command fetches the skill straight from GitHub with the open skills CLI.
No download: this skill’s licence (GPL-3.0) does not let us redistribute its files. The install commands fetch them from GitHub instead.
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