kegg-pathway-analysis
From the author
Guide to KEGG pathway enrichment for DEG results. Covers ORA vs GSEA, mandatory directionality splitting, KEGG organism codes, API failure handling with offline fallbacks, cross-condition comparisons, and answer-first reporting. Consult when running enrichment with clusterProfiler or gseapy.
Install
npx skills add jaechang-hits/SciAgent-Skills --skill kegg-pathway-analysis -a claude-code
Installs to .claude/skills/kegg-pathway-analysis/ · Each command fetches the skill straight from GitHub with the open skills CLI.
Byte-identical to the scanned commit, with the repository’s licence and a SOURCE.txt.
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