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YouRA addresses the critical structural gap between AI-generated manuscript claims and actual experimental execution by introducing a persistent state architecture for autonomous research agents. This system verifies hypotheses and tracks failure histories across long-horizon pipelines, significantly improving data provenance and reducing hallucinations compared to current end-to-end research agents. The approach offers a robust framework for ensuring claim-evidence alignment in future scientific discovery workflows driven by AI.
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YouRA: A Persistent-State Architecture for Evidence-Traceable Autonomous Research Agents

arXiv3 min read

arXiv:2610.01097v1 Announce Type: new Abstract: End-to-end research agents can now produce complete scientific papers, yet manuscript claims often diverge from executed experiments. This gap is structural: research state, failure histories, and claim-evidence alignment are not maintained as persistent, verifiable state across long-horizon pipelines. We present YouRA (Your Research Agent), an architecture for stateful, evidence-traceable autonomous research. YouRA preserves research state, execution evidence, and failure history across the research trajectory by integrating three components: a Verification State Architecture (VSA) that tracks hypotheses, gates, and evidence pointers; an Independent Controller that turns state and reflection records into lifecycle, recovery, and debate/review control while separating control from execution; and Stateful Reflection that logs failures as structured lessons and routes recovery through bounded repair, redesign, or reset. On MLR-Bench's predefined ten-task end-to-end subset, YouRA improves over both MLR-Agent and AI Scientist V2 on scalar Overall across all three matched backbones. An automated diagnostic using MLR-Bench's hallucination taxonomy reports intersection/union counts for four fact-based failure types, and data-provenance diagnostic shows more real-data-based outputs. Ablating each of the four components (the VSA, the Independent Controller, MCP tool access, and reflection-guided recovery) supports their separable contributions. Removing either core-state component drops YouRA below the full system. Code: https://github.com/PrayPrey/Your-Research-Agent.

Abstract:End-to-end research agents can now produce complete scientific papers, yet manuscript claims often diverge from executed experiments. This gap is structural: research state, failure histories, and claim-evidence alignment are not maintained as persistent, verifiable state across long-horizon pipelines. We present YouRA (Your Research Agent), an architecture for stateful, evidence-traceable autonomous research. YouRA preserves research state, execution evidence, and failure history across the research trajectory by integrating three components: a Verification State Architecture (VSA) that tracks hypotheses, gates, and evidence pointers; an Independent Controller that turns state and reflection records into lifecycle, recovery, and debate/review control while separating control from execution; and Stateful Reflection that logs failures as structured lessons and routes recovery through bounded repair, redesign, or reset. On MLR-Bench's predefined ten-task end-to-end subset, YouRA improves over both MLR-Agent and AI Scientist V2 on scalar Overall across all three matched backbones. An automated diagnostic using MLR-Bench's hallucination taxonomy reports intersection/union counts for four fact-based failure types, and data-provenance diagnostic shows more real-data-based outputs. Ablating each of the four components (the VSA, the Independent Controller, MCP tool access, and reflection-guided recovery) supports their separable contributions. Removing either core-state component drops YouRA below the full system. Code: this https URL.

Accepted to the AACL-IJCNLP 2026 Main Conference. 21 pages, 5 figures, 17 tables

Artificial Intelligence (cs.AI)

arXiv:2610.01097 [cs.AI]

(or arXiv:2610.01097v1 [cs.AI] for this version)

https://doi.org/10.48550/arXiv.2610.01097 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 305 words

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