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This paper introduces SeeExplainer, a parameter-free method for generating faithful instance-level explanations of graph neural networks by capturing synergistic effects among edges through granular-ball refinement. By decomposing graphs into disjoint structural units before perturbation analysis, the approach improves upon existing edge-selection techniques that often overlook complex interdependencies in network data. The results demonstrate superior performance on various classification datasets compared to current state-of-the-art baselines for interpreting GNN decisions.
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Towards Faithful Graph Explanations with Synergistic Edge Effects via Granular Balls

arXiv2 min read

arXiv:2607.21381v1 Announce Type: new Abstract: Instance-level explanations aim to reveal the rationale behind a model's decisions for a specific graph. Previous methods explain graph neural networks (GNNs) by selecting important edges to induce subgraphs, where edge importance is assessed by perturbing each edge and observing changes in the model predictions. However, they often neglect the synergistic effects among edges, which are crucial for accurately characterizing edge importance. To address this issue, we propose SeeExplainer, a parameter-free explainer to interpret GNNs. Specifically, we first introduce a granular-ball graph refinement mechanism that decomposes a graph into several disjoint granular-balls with no fixed size, and utilize them as nodes to construct a structural graph. This process can better capture the synergistic effects among edges. Then, we perturb nodes and edges in the structural graph to generate explanatory subgraphs based on their respective contributions. Experiments on several graph classification datasets of different networks show that SeeExplainer outperforms state-of-the-art baselines.

Abstract:Instance-level explanations aim to reveal the rationale behind a model's decisions for a specific graph. Previous methods explain graph neural networks (GNNs) by selecting important edges to induce subgraphs, where edge importance is assessed by perturbing each edge and observing changes in the model predictions. However, they often neglect the synergistic effects among edges, which are crucial for accurately characterizing edge importance. To address this issue, we propose SeeExplainer, a parameter-free explainer to interpret GNNs. Specifically, we first introduce a granular-ball graph refinement mechanism that decomposes a graph into several disjoint granular-balls with no fixed size, and utilize them as nodes to construct a structural graph. This process can better capture the synergistic effects among edges. Then, we perturb nodes and edges in the structural graph to generate explanatory subgraphs based on their respective contributions. Experiments on several graph classification datasets of different networks show that SeeExplainer outperforms state-of-the-art baselines.

Artificial Intelligence (cs.AI)

arXiv:2607.21381 [cs.AI]

(or arXiv:2607.21381v1 [cs.AI] for this version)

https://doi.org/10.48550/arXiv.2607.21381 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 244 words

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