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This research introduces ReCurveflow, a flow matching framework that improves transition state prediction in chemical reactions by learning curved reaction trajectories rather than relying on linear paths. By incorporating off-path correction mechanisms, the model demonstrates superior accuracy and robustness against exposure bias compared to existing baselines. The work represents a significant methodological advance in applying machine learning to complex molecular geometry optimization problems.
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ReCurveflow: A Flow Matching Framework that Learns Curved Reaction Trajectories to Predict Transition State Geometries

arXiv2 min read

arXiv:2608.20869v1 Announce Type: new Abstract: Predicting transition states (TS) in chemical reactions is crucial, as they provide insights into reaction mechanisms. Recent work on TS prediction have focused on flow matching supervised on straight linear paths that do not align with actual reaction trajectories. We propose a novel flow matching-based framework ReCurveflow that learns to predict TS geometries supervised on continuously curved reference paths interpolated from a full NEB-derived band of molecular geometries. We also introduce off-path correction, which grants ReCurveflow with the ability to produce corrective velocity fields when engaged off-path geometry states during inference rollout, leading to better resistance against exposure bias and accuracy in TS prediction. Across three data splits and six evaluation metrics, ReCurveflow achieves the best result on the majority of split-metric combinations against seven baselines. Qualitative analyses further show that ReCurveflow generates reaction trajectories with energy profiles that closely track the reference NEB path, provides initializations that ease the NEB optimization bottleneck, and exhibits the intended corrective behavior in its learned velocity fields. The ReCurveflow codebase is publicly available at https://github.com/dmis-lab/ReCurveflow.

Abstract:Predicting transition states (TS) in chemical reactions is crucial, as they provide insights into reaction mechanisms. Recent work on TS prediction have focused on flow matching supervised on straight linear paths that do not align with actual reaction trajectories. We propose a novel flow matching-based framework ReCurveflow that learns to predict TS geometries supervised on continuously curved reference paths interpolated from a full NEB-derived band of molecular geometries. We also introduce off-path correction, which grants ReCurveflow with the ability to produce corrective velocity fields when engaged off-path geometry states during inference rollout, leading to better resistance against exposure bias and accuracy in TS prediction. Across three data splits and six evaluation metrics, ReCurveflow achieves the best result on the majority of split-metric combinations against seven baselines. Qualitative analyses further show that ReCurveflow generates reaction trajectories with energy profiles that closely track the reference NEB path, provides initializations that ease the NEB optimization bottleneck, and exhibits the intended corrective behavior in its learned velocity fields. The ReCurveflow codebase is publicly available at this https URL.

Artificial Intelligence (cs.AI); Machine Learning (cs.LG)

arXiv:2608.20869 [cs.AI]

(or arXiv:2608.20869v1 [cs.AI] for this version)

https://doi.org/10.48550/arXiv.2608.20869 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 271 words

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