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The paper addresses a practical problem for teams building retrieval-augmented biomedical QA: automatic metrics often disagree with human judgments, and they can point development in different directions. Its proposal is to calibrate direct-assessment metrics with a small set of human preference labels, which the authors report beats treating all metrics equally or relying on one "best" metric across several datasets. Readers should note that these are preprint results, and the value depends on how much human labeling is needed and whether the gains transfer beyond biomedicine.
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Improving the Evaluation of Biomedical Question Answering with Few Human Preference Signals

arXiv2 min read

arXiv:2610.16008v1 Announce Type: new Abstract: Retrieval-Augmented Generation (RAG) systems are increasingly used for biomedical Question Answering (QA). However, evaluating their effectiveness remains challenging due to the lack of reliable reference resources and the frequent misalignment between automatic evaluation metrics and human judgments. One practical question is how evaluation results should be used to guide development decisions, especially when they correlate weakly with human judgments and may even lead to different conclusions. We explore how to use a small amount of human preference signals to calibrate direct assessment evaluation metrics, and show that calibrated metrics consistently outperform baselines that either treat all metrics equally or rely on a single best metric across multiple datasets.

Abstract:Retrieval-Augmented Generation (RAG) systems are increasingly used for biomedical Question Answering (QA). However, evaluating their effectiveness remains challenging due to the lack of reliable reference resources and the frequent misalignment between automatic evaluation metrics and human judgments. One practical question is how evaluation results should be used to guide development decisions, especially when they correlate weakly with human judgments and may even lead to different conclusions. We explore how to use a small amount of human preference signals to calibrate direct assessment evaluation metrics, and show that calibrated metrics consistently outperform baselines that either treat all metrics equally or rely on a single best metric across multiple datasets.

Computation and Language (cs.CL); Machine Learning (cs.LG)

arXiv:2610.16008 [cs.CL]

(or arXiv:2610.16008v1 [cs.CL] for this version)

https://doi.org/10.48550/arXiv.2610.16008 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 206 words

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