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This research presents HyDI, a hybrid ensemble architecture that integrates Deep Learning with Inductive Logic Programming to enhance explainability in hierarchical multi-label classification tasks. By substituting deep learning models with rule-based classifiers at the leaf nodes of a hierarchy, the system generates both global and local explanations for chemical entity classifications within the ChEBI ontology. The approach directly addresses the interpretability gap in black-box models by combining neural network performance with transparent, logic-derived rules.
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HyDI: A hybrid Deep Learning-Inductive Logic Programming ensemble for multi-label classification

arXiv2 min read

arXiv:2609.37740v1 Announce Type: new Abstract: While attaining remarkable results for many applications, Deep Learning models are notoriously difficult to explain. This work introduces HyDI, a hybrid ensemble architecture for hierarchical multi-label classification. It combines a Deep Learning (DL) model with rule-based classifiers generated by Inductive Logic Programming (ILP). For leaf classes of the label hierarchy, the rule-based classifiers replace the DL model, leading to more transparent classification results. HyDI is applied to the Chemical Entities of Biological Interest (ChEBI) ontology, providing ILP-generated rules for 314 classes. For these classes, HyDI can generate global explanations as well as local explanations that combine visual and text-based descriptions.

Abstract:While attaining remarkable results for many applications, Deep Learning models are notoriously difficult to explain. This work introduces HyDI, a hybrid ensemble architecture for hierarchical multi-label classification. It combines a Deep Learning (DL) model with rule-based classifiers generated by Inductive Logic Programming (ILP). For leaf classes of the label hierarchy, the rule-based classifiers replace the DL model, leading to more transparent classification results. HyDI is applied to the Chemical Entities of Biological Interest (ChEBI) ontology, providing ILP-generated rules for 314 classes. For these classes, HyDI can generate global explanations as well as local explanations that combine visual and text-based descriptions.

Machine Learning (cs.LG); Logic in Computer Science (cs.LO)

arXiv:2609.37740 [cs.LG]

(or arXiv:2609.37740v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2609.37740 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 199 words

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