Hierarchical Specialised Ensembles for Classification of Zebrafish Phenotypes Using the Selected Image Recognition Methods

Abstract:We propose and evaluate three hierarchical ensemble setups for zebrafish phenotype classification from embryo images. In all setups, stage 1 uses a single four-class classifier to assign images to one of the exclusive phenotypes: Normal, Chorion, Dead, or Other. Images classified as Other are then processed in stage 2, where the ensemble design differs across setups: a single multi-label classifier, two specialized multi-label classifiers, or an ensemble of binary classifiers. We compare these setups using three backbone architectures: ResNet18, ViT, and ConvNeXt. Overall, ConvNeXt achieves the best performance across setups, while the specialized hierarchical ensemble in setup 2 provides the best balance in terms of F1-score. The results show that the proposed specialised hierarchical ensembles are effective for zebrafish phenotype recognition, and suggest that ConvNeXt is particularly useful backbone model.

Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG)

arXiv:2607.15698 [cs.CV]

(or arXiv:2607.15698v1 [cs.CV] for this version)

https://doi.org/10.48550/arXiv.2607.15698 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website.

Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them.

Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.