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This research introduces Graph Residual Conjugate Diffusion (GRCD), a novel framework that optimizes the noise schedule for graph-based diffusion models by assigning mode-dependent clocks rather than a shared one. By ensuring equal conditional signal-to-noise ratios across all spectral modes, GRCD significantly reduces sampling budget requirements while maintaining high fidelity in generating complex graph signals like traffic data and weather patterns. The method achieves substantial improvements in maximum mean discrepancy metrics with fewer function evaluations compared to existing graph-aware diffusion techniques.
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Graph Residual Conjugate Diffusion: SNR-Equalized Heat Flow for Graph Signals

arXiv3 min read

arXiv:2609.39658v1 Announce Type: new Abstract: Diffusion models generate data by reversing a forward corruption process that typically approaches a simple Gaussian prior. Recent work has extended this framework to signals supported on fixed graphs, e.g., road-network traffic and sensor-network measurements. Many graph signals have nonuniform spectral energy, whereas isotropic corruption adds the same conditional noise variance to every graph-frequency mode. Driving all modes to near-zero terminal signal-to-noise ratio (SNR) requires strong corruption, which increases the noise range that must be covered under a fixed sampling budget. We introduce Graph Residual Conjugate Diffusion (GRCD), which replaces the shared clock of graph heat diffusion with a mode-dependent clock that gives every graph-Fourier mode the same conditional SNR. GRCD fits a zero-mean graph-spectral Gaussian reference on the training split and stops at a finite terminal SNR at which the propagated reference still carries the fitted spectral variances. The Gaussian component has an exact modewise propagator in the probability-flow ODE, so sampling advances it analytically and integrates only the learned residual score numerically. We evaluate GRCD on five settings (METR-LA traffic, Molene weather, and three stochastic block models) against seven comparators under a matched protocol: Graph-Aware Diffusion (GAD), EDM (graph backbone), two adaptations of Whitened Score Diffusion (WSD), and three preconditioning controls. At four function evaluations (NFEs), GRCD lowers averaged maximum mean discrepancy (aMMD) by 22 to 36 times over the best comparator on all five settings, reaching 0.054 on METR-LA, where it clears an aMMD 0.1 target with 87% less sampling wall-clock time than the cheapest comparator that reaches it. Fitting the terminal reference reduces aMMD by 2.7 to 7.3 times at finite terminal SNR, while the factors shrink to 1.00 to 1.01 near zero.

Abstract:Diffusion models generate data by reversing a forward corruption process that typically approaches a simple Gaussian prior. Recent work has extended this framework to signals supported on fixed graphs, e.g., road-network traffic and sensor-network measurements. Many graph signals have nonuniform spectral energy, whereas isotropic corruption adds the same conditional noise variance to every graph-frequency mode. Driving all modes to near-zero terminal signal-to-noise ratio (SNR) requires strong corruption, which increases the noise range that must be covered under a fixed sampling budget. We introduce Graph Residual Conjugate Diffusion (GRCD), which replaces the shared clock of graph heat diffusion with a mode-dependent clock that gives every graph-Fourier mode the same conditional SNR. GRCD fits a zero-mean graph-spectral Gaussian reference on the training split and stops at a finite terminal SNR at which the propagated reference still carries the fitted spectral variances. The Gaussian component has an exact modewise propagator in the probability-flow ODE, so sampling advances it analytically and integrates only the learned residual score numerically. We evaluate GRCD on five settings (METR-LA traffic, Molene weather, and three stochastic block models) against seven comparators under a matched protocol: Graph-Aware Diffusion (GAD), EDM (graph backbone), two adaptations of Whitened Score Diffusion (WSD), and three preconditioning controls. At four function evaluations (NFEs), GRCD lowers averaged maximum mean discrepancy (aMMD) by 22 to 36 times over the best comparator on all five settings, reaching 0.054 on METR-LA, where it clears an aMMD 0.1 target with 87% less sampling wall-clock time than the cheapest comparator that reaches it. Fitting the terminal reference reduces aMMD by 2.7 to 7.3 times at finite terminal SNR, while the factors shrink to 1.00 to 1.01 near zero.

Machine Learning (cs.LG)

I.2.6; G.3; G.1.7

arXiv:2609.39658 [cs.LG]

(or arXiv:2609.39658v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2609.39658 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 374 words

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