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This research introduces WAMRViT, a Vision Transformer architecture that natively tokenizes Adaptive Mesh Refinement (AMR) data using dynamic quadtrees to overcome the spatial resolution limits of uniform grids in partial differential equation forecasting. By jointly encoding position and refinement levels, the model achieves stable long-horizon rollouts with significantly reduced attention costs compared to conventional fixed-budget methods. This advancement represents a significant step forward in machine learning surrogates for scientific computing, enabling efficient handling of fine-scale phenomena like shocks and reaction fronts.
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Dynamic Quadtree Tokenization and Transformer for Adaptive Mesh PDE Forecasting

arXiv3 min read

arXiv:2610.04044v1 Announce Type: cross Abstract: The quadratic attention cost of Vision Transformers (ViTs) forces a trade-off between spatial resolution and rollout horizon, particularly for fine-scale PDEs where shocks, reaction fronts, and material interfaces occupy small, evolving regions of the domain. Conventional neural surrogates also lack mechanisms to adapt resolution dynamically. We propose WAMRViT, a ViT that tokenizes inputs as balanced quadtrees using a wavelet-inspired refinement criterion, jointly encodes position and refinement level with 3D rotary positional embeddings, and regrids in cell space during inference for stable long-horizon rollouts. A multi-scale variant retains each leaf at its native source resolution and lets the model learn across resolution levels. Unlike fixed-budget adaptive-tokenization methods, WAMRViT imposes no predetermined token count and supports fully adaptive topology throughout autoregressive rollout. To our knowledge, it is the first machine-learning surrogate to natively tokenize multi-level Adaptive Mesh Refinement (AMR) data. On uniform-grid benchmarks, uniform-patch WAMRViT improves finest-level region-of-interest VRMSE over a finest-patch uniform ViT while using substantially fewer tokens. The multi-scale variant achieves the lowest first-step full-field RMSE and VRMSE on both benchmarks and improves rollout-averaged full-field and refined-region accuracy at long horizons. With parallelized regridding, its end-to-end rollout cost lies between finest-patch and approximately token-matched coarser-patch ViTs. On a complex AMR combustion problem whose finest features cannot be represented natively by the evaluated uniform-grid baselines, WAMRViT operates directly on adaptive cells and substantially reduces finest-level error at matched transformer capacity. Code: https://github.com/tonyzyl/wamrvit

Abstract:The quadratic attention cost of Vision Transformers (ViTs) forces a trade-off between spatial resolution and rollout horizon, particularly for fine-scale PDEs where shocks, reaction fronts, and material interfaces occupy small, evolving regions of the domain. Conventional neural surrogates also lack mechanisms to adapt resolution dynamically. We propose WAMRViT, a ViT that tokenizes inputs as balanced quadtrees using a wavelet-inspired refinement criterion, jointly encodes position and refinement level with 3D rotary positional embeddings, and regrids in cell space during inference for stable long-horizon rollouts. A multi-scale variant retains each leaf at its native source resolution and lets the model learn across resolution levels. Unlike fixed-budget adaptive-tokenization methods, WAMRViT imposes no predetermined token count and supports fully adaptive topology throughout autoregressive rollout. To our knowledge, it is the first machine-learning surrogate to natively tokenize multi-level Adaptive Mesh Refinement (AMR) data. On uniform-grid benchmarks, uniform-patch WAMRViT improves finest-level region-of-interest VRMSE over a finest-patch uniform ViT while using substantially fewer tokens. The multi-scale variant achieves the lowest first-step full-field RMSE and VRMSE on both benchmarks and improves rollout-averaged full-field and refined-region accuracy at long horizons. With parallelized regridding, its end-to-end rollout cost lies between finest-patch and approximately token-matched coarser-patch ViTs. On a complex AMR combustion problem whose finest features cannot be represented natively by the evaluated uniform-grid baselines, WAMRViT operates directly on adaptive cells and substantially reduces finest-level error at matched transformer capacity. Code: this https URL

Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG)

arXiv:2610.04044 [cs.CV]

(or arXiv:2610.04044v1 [cs.CV] for this version)

https://doi.org/10.48550/arXiv.2610.04044 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 333 words

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