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This paper introduces Discrete Action Matching (DAM), a novel framework for learning stochastic population dynamics from unpaired temporal samples using discrete Wasserstein geometry. By reducing density dependence to neighboring ratios, the method enables graph-supported Markov sampling and effectively reconstructs marginal paths in complex systems like mouse gastrulation. The work advances machine learning techniques for modeling intricate physical and biological processes where traditional inverse problems are ill-posed.
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Discrete Action Matching: Learning Stochastic Dynamics from Samples via State Graphs

arXiv2 min read

arXiv:2610.05071v1 Announce Type: cross Abstract: Learning population dynamics from unpaired temporal marginals is an ill-posed inverse problem that requires structural assumptions on the underlying dynamics. We introduce $\textit{Discrete Action Matching}$ (DAM), a finite-state counterpart of Action Matching based on discrete Wasserstein geometry. For a prescribed marginal path and transport geometry, we derive an action-minimization objective for its canonical minimum-kinetic-energy current. Our key observation is that the density dependence of the discrete action reduces to neighboring density ratios. Along an empirical interpolation of the snapshots, DAM first estimates these ratios and then learns an action potential. The learned fields also define a graph-supported Markov sampler. Experiments on controlled synthetic dynamics and real mouse gastrulation data evaluate marginal reconstruction and interpolation. Additional experiments approximate numerical surface-transport paths from paired samples.

Abstract:Learning population dynamics from unpaired temporal marginals is an ill-posed inverse problem that requires structural assumptions on the underlying dynamics. We introduce $\textit{Discrete Action Matching}$ (DAM), a finite-state counterpart of Action Matching based on discrete Wasserstein geometry. For a prescribed marginal path and transport geometry, we derive an action-minimization objective for its canonical minimum-kinetic-energy current. Our key observation is that the density dependence of the discrete action reduces to neighboring density ratios. Along an empirical interpolation of the snapshots, DAM first estimates these ratios and then learns an action potential. The learned fields also define a graph-supported Markov sampler. Experiments on controlled synthetic dynamics and real mouse gastrulation data evaluate marginal reconstruction and interpolation. Additional experiments approximate numerical surface-transport paths from paired samples.

Machine Learning (cs.LG); Artificial Intelligence (cs.AI)

arXiv:2610.05071 [cs.LG]

(or arXiv:2610.05071v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2610.05071 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 220 words

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