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This research introduces a density-reweighted Entropic Optimal Transport framework designed to correct geometrically misleading correspondences caused by disparate sampling densities in low-dimensional structures. By decoupling geometry from sampling artifacts, the method ensures that dataset alignment relies on true spatial proximity rather than point distribution frequency. The work advances theoretical understanding of transport plans and offers practical improvements for data analysis tasks where density disparity is a significant challenge.
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Density-Reweighted Entropic Optimal Transport: Decoupling Geometry from Sampling Density

arXiv2 min read

arXiv:2608.16506v1 Announce Type: cross Abstract: Dataset alignment is a central step in data analysis across science and engineering, where the goal is to match observations between datasets. Entropic Optimal Transport (EOT) offers a computationally tractable framework for this task by encoding cross-dataset affinities in a transport plan. However, when two datasets are sampled from geometrically similar low-dimensional structures with substantially different sampling densities, the EOT plan may match points by relative sampling density rather than geometric proximity, yielding geometrically misleading correspondences. To address this issue, we propose a density-reweighted EOT framework in which the influence of sampling density on the transport plan can be discounted to a desired degree, ranging from standard EOT to alignment driven purely by underlying geometry. Under suitable regularity conditions, we establish convergence of the reweighted EOT plan to a family of population-level plans whose dependence on sampling density is made explicit. Through simulations, we show that our approach recovers geometrically faithful correspondences, improving over related EOT-based frameworks when datasets exhibit substantial sampling density disparity.

Abstract:Dataset alignment is a central step in data analysis across science and engineering, where the goal is to match observations between datasets. Entropic Optimal Transport (EOT) offers a computationally tractable framework for this task by encoding cross-dataset affinities in a transport plan. However, when two datasets are sampled from geometrically similar low-dimensional structures with substantially different sampling densities, the EOT plan may match points by relative sampling density rather than geometric proximity, yielding geometrically misleading correspondences. To address this issue, we propose a density-reweighted EOT framework in which the influence of sampling density on the transport plan can be discounted to a desired degree, ranging from standard EOT to alignment driven purely by underlying geometry. Under suitable regularity conditions, we establish convergence of the reweighted EOT plan to a family of population-level plans whose dependence on sampling density is made explicit. Through simulations, we show that our approach recovers geometrically faithful correspondences, improving over related EOT-based frameworks when datasets exhibit substantial sampling density disparity.

Machine Learning (stat.ML); Machine Learning (cs.LG); Applications (stat.AP); Methodology (stat.ME)

arXiv:2608.16506 [stat.ML]

(or arXiv:2608.16506v1 [stat.ML] for this version)

https://doi.org/10.48550/arXiv.2608.16506 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 265 words

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