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This research introduces CoSWA-YOLOv12, a specialized instance-segmentation model designed to solve the critical challenge of detecting microscopic malaria parasites that are significantly smaller than other species in the same field. By implementing a cooperative scale-adaptive Wasserstein assignment strategy, the method effectively balances supervision between tiny targets and larger objects without degrading overall localization accuracy. The approach demonstrates improved recall for the deadliest malaria strain while maintaining compatibility with standard pretrained weights, offering a practical advancement for automated microscopy in low-resource diagnostic settings.
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CoSWA-YOLOv12: Scale-Invariant Tiny Object Detection and Segmentation of Malaria Parasites

arXiv3 min read

arXiv:2609.29527v1 Announce Type: cross Abstract: Automated microscopy could widen access to malaria diagnosis in low-resource settings, but the deadliest species, P. falciparum, presents in its early ring stage as an object only a few tens of pixels wide. Such tiny targets are systematically under-detected: overlap-based label assignment starves them of positive samples, and overlap-based box regression gives weak gradients at their scale. The Normalized Gaussian Wasserstein Distance (NWD) repairs both effects, but applied uniformly across a slide that also holds objects three to four times larger it loosens their supervision and erodes their localisation, so overall accuracy can fall even as the tiny class improves. We present CoSWA-YOLOv12, a compact YOLOv12 instance-segmentation detector whose core Cooperative Scale-adaptive Wasserstein Assignment routes the Wasserstein treatment to an object in inverse proportion to its size, tapering back to standard assignment for larger species. Two further components support it: a wavelet detail residual, and a min-max Gaussian regression loss (M2-NWD). All three additions are transfer-safe: each reproduces the standard pretrained model exactly at initialisation, so public pretrained weights load without any loss of accuracy. On a five-class Rwandan thick-smear dataset, CoSWA-YOLOv12 raises P. falciparum recall from 0.63 to 0.74 and mAP@50 from 0.73 to 0.81 (mask), cuts missed P. falciparum from 38% to 15%, and improves strict-localisation mAP@50-95 on all five classes for both detection and segmentation, while a 2x2 ablation shows the scale gate and the regression loss are synergistic.

Abstract:Automated microscopy could widen access to malaria diagnosis in low-resource settings, but the deadliest species, P. falciparum, presents in its early ring stage as an object only a few tens of pixels wide. Such tiny targets are systematically under-detected: overlap-based label assignment starves them of positive samples, and overlap-based box regression gives weak gradients at their scale. The Normalized Gaussian Wasserstein Distance (NWD) repairs both effects, but applied uniformly across a slide that also holds objects three to four times larger it loosens their supervision and erodes their localisation, so overall accuracy can fall even as the tiny class improves. We present CoSWA-YOLOv12, a compact YOLOv12 instance-segmentation detector whose core Cooperative Scale-adaptive Wasserstein Assignment routes the Wasserstein treatment to an object in inverse proportion to its size, tapering back to standard assignment for larger species. Two further components support it: a wavelet detail residual, and a min-max Gaussian regression loss (M2-NWD). All three additions are transfer-safe: each reproduces the standard pretrained model exactly at initialisation, so public pretrained weights load without any loss of accuracy. On a five-class Rwandan thick-smear dataset, CoSWA-YOLOv12 raises P. falciparum recall from 0.63 to 0.74 and mAP@50 from 0.73 to 0.81 (mask), cuts missed P. falciparum from 38% to 15%, and improves strict-localisation mAP@50-95 on all five classes for both detection and segmentation, while a 2x2 ablation shows the scale gate and the regression loss are synergistic.

Accepted at The 3rd MIRASOL workshop, a satellite event at MICCAI 2026. To appear in Springer Lecture Notes in Computer Science (LNCS)

Computer Vision and Pattern Recognition (cs.CV); Artificial Intelligence (cs.AI)

arXiv:2609.29527 [cs.CV]

(or arXiv:2609.29527v1 [cs.CV] for this version)

https://doi.org/10.48550/arXiv.2609.29527 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 354 words

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