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This research applies continual learning techniques to optimize bio-nanomachine communication protocols, demonstrating improved accuracy in estimating performance across sequentially complex experimental settings. By utilizing a method called Affine Memory Replay, the study effectively balances model stability with adaptability while managing training costs for molecular data tasks. While the application involves biological systems, the core contribution lies in advancing machine learning methodologies for specialized simulation environments.
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Continual Learning for Reliable In-Sequence Molecular Communication

arXiv2 min read

arXiv:2610.20426v1 Announce Type: new Abstract: This paper considers reliable in-sequence molecular communication, where bio-nanomachines exchange molecule-encoded information in a specified order, and investigates a new simulation-based method to incrementally evaluate communication protocols by gradually increasing the complexity of experimental settings. The proposed method, called Affine Memory Replay (AMR), builds a continual learning (CL) model to estimate communication performance between bio-nanomachines. AMR stores past simulation samples and synthesizes additional replay samples through interpolation and extrapolation between past samples. Through incremental performance estimation tasks, it replays both past and synthetic samples to regularize model updates, helping the model adapt to new experimental settings while retaining knowledge from earlier ones. Experimental results show that AMR significantly outperforms existing CL methods in maintaining overall estimation accuracy across sequentially learned estimation tasks. It effectively balances memory stability and learning plasticity under moderate training cost.

Abstract:This paper considers reliable in-sequence molecular communication, where bio-nanomachines exchange molecule-encoded information in a specified order, and investigates a new simulation-based method to incrementally evaluate communication protocols by gradually increasing the complexity of experimental settings. The proposed method, called Affine Memory Replay (AMR), builds a continual learning (CL) model to estimate communication performance between bio-nanomachines. AMR stores past simulation samples and synthesizes additional replay samples through interpolation and extrapolation between past samples. Through incremental performance estimation tasks, it replays both past and synthetic samples to regularize model updates, helping the model adapt to new experimental settings while retaining knowledge from earlier ones. Experimental results show that AMR significantly outperforms existing CL methods in maintaining overall estimation accuracy across sequentially learned estimation tasks. It effectively balances memory stability and learning plasticity under moderate training cost.

8 pages, 7 figures. Published in 2026 20th IIAI International Congress on Advanced Applied Informatics

Machine Learning (cs.LG)

arXiv:2610.20426 [cs.LG]

(or arXiv:2610.20426v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2610.20426 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

https://doi.org/10.23919/IIAI-AAICPS00095.2026.00072 Focus to learn more DOI(s) linking to related resources

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Full text under the publisher's open licence · 253 words

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