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This research demonstrates that end-to-end audio-language models can effectively automate clinical SOAP note generation directly from long-form doctor-patient conversations, outperforming traditional cascaded ASR+LLM pipelines. The study highlights a critical trade-off in model scaling for this domain, where increasing parameters from 3B to 30B significantly enhances concept extraction and summarization quality without the intermediate transcript step. These findings offer valuable insights for developers optimizing large models for specialized healthcare documentation tasks.
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Bridging the Modality Gap in Long-Form Clinical Audio: A Comparative Study of Lightweight and Heavyweight End-to-End SOAP Generation

arXiv2 min read

arXiv:2609.14467v1 Announce Type: cross Abstract: Automating clinical documentation from long-form doctor-patient conversations remains challenging for modern audio-language models. While cascaded ASR systems perform well, end-to-end (E2E) models often struggle with information loss and hallucinations on extended audio. For the BeTraC 2026 challenge, the ASLP team presents a fully E2E multimodal system that generates structured SOAP notes directly from audio, bypassing intermediate transcripts. We constructed a 1.41-million-sample multi-task corpus and applied a multi-stage pipeline: domain pre-training, supervised fine-tuning, and reward optimization. Evaluating the architecture under both Lightweight (3B) and Heavyweight (30B) constraints reveals that each training stage progressively enhances performance. Furthermore, scaling to 30B parameters substantially boosts concept extraction and summarization quality. Ultimately, our E2E systems consistently outperform representative cascaded ASR+LLM baselines, proving the efficacy of direct multimodal optimization for clinical documentation.

Abstract:Automating clinical documentation from long-form doctor-patient conversations remains challenging for modern audio-language models. While cascaded ASR systems perform well, end-to-end (E2E) models often struggle with information loss and hallucinations on extended audio. For the BeTraC 2026 challenge, the ASLP team presents a fully E2E multimodal system that generates structured SOAP notes directly from audio, bypassing intermediate transcripts. We constructed a 1.41-million-sample multi-task corpus and applied a multi-stage pipeline: domain pre-training, supervised fine-tuning, and reward optimization. Evaluating the architecture under both Lightweight (3B) and Heavyweight (30B) constraints reveals that each training stage progressively enhances performance. Furthermore, scaling to 30B parameters substantially boosts concept extraction and summarization quality. Ultimately, our E2E systems consistently outperform representative cascaded ASR+LLM baselines, proving the efficacy of direct multimodal optimization for clinical documentation.

Sound (cs.SD); Artificial Intelligence (cs.AI); Audio and Speech Processing (eess.AS)

arXiv:2609.14467 [cs.SD]

(or arXiv:2609.14467v1 [cs.SD] for this version)

https://doi.org/10.48550/arXiv.2609.14467 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

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Full text under the publisher's open licence · 227 words

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