aiqbench analysis
This research addresses the computational bottleneck of kernel-based optimal transport by introducing a specialized semismooth Newton method that significantly reduces iteration counts compared to standard interior-point approaches. The proposed algorithm maintains global convergence while achieving local quadratic rates, making high-dimensional functional estimation tractable for larger sample sizes in machine learning applications. By resolving efficiency issues inherent to mass-conservation constraints, this work directly enhances the scalability of optimal transport methods used in fields like single-cell genomics and domain adaptation.
A Specialized Semismooth Newton Method for Kernel-Based Optimal Transport

Kernel-based optimal transport (OT) estimators offer an alternative, functional estimation procedure to address OT problems from samples. Recent works suggest that these estimators are more statistically efficient than plug-in (linear programming-based) OT estimators when comparing probability measures in high-dimensions [Vacher et al., 2021]. Unfortunately, that statistical benefit comes at a very steep computational price: because their computation relies on the short-step interior-point method (SSIPM), which comes with a large iteration count in practice, these estimators quickly become…
AuthorsTianyi Lin†, Marco Cuturi, Michael I. Jordan‡
Kernel-based optimal transport (OT) estimators offer an alternative, functional estimation procedure to address OT problems from samples. Recent works suggest that these estimators are more statistically efficient than plug-in (linear programming-based) OT estimators when comparing probability measures in high-dimensions [Vacher et al., 2021]. Unfortunately, that statistical benefit comes at a very steep computational price: because their computation relies on the short-step interior-point method (SSIPM), which comes with a large iteration count in practice, these estimators quickly become intractable w.r.t. sample size n. To scale these estimators to larger n, we propose a nonsmooth fixed-point model for the kernel-based OT problem, and show that it can be efficiently solved via a specialized semismooth Newton (SSN) method: We show, exploring the problem’s structure, that the per-iteration cost of performing one SSN step can be significantly reduced in practice. We prove that our SSN method achieves a global convergence rate of O(1/√k), and a local quadratic convergence rate under standard regularity conditions. We show substantial speedups over SSIPM on both synthetic and real datasets.
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Two salient limitations have long hindered the relevance of optimal transport methods to machine learning. First, the O(n3)O(n^3) computational cost of standard sample-based solvers (when used on batches of nn samples) is prohibitive. Second, the mass conservation constraint makes OT solvers too rigid in practice: because they must match \textit{all} points from both measures, their output can be heavily influenced by…
The matching principles behind optimal transport (OT) play an increasingly important role in machine learning, a trend which can be observed when OT is used to disambiguate datasets in applications (e.g. single-cell genomics) or used to improve more complex methods (e.g. balanced attention in transformers or self-supervised learning). To scale to more challenging problems, there is a growing consensus that OT requires solvers that can operate on…
Full text under the publisher's open licence · 310 words
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