snakemake-workflow-engine
De la autor
Python-based workflow manager for reproducible, scalable pipelines. Define rules with file-based dependencies; Snakemake resolves execution order and parallelism. Runs local, SLURM, LSF, AWS, GCP via profiles; per-rule conda/Singularity envs. For NGS pipelines, ML training, and multi-step file processing. Use Nextflow for Groovy dataflow or nf-core integration.
Instalare
npx skills add jaechang-hits/SciAgent-Skills --skill snakemake-workflow-engine -a claude-code
Se instalează în .claude/skills/snakemake-workflow-engine/ · Fiecare comandă descarcă skill-ul direct de pe GitHub cu utilitarul open source skills.
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