Topology-Aware Reasoning over Incomplete Knowledge Graph with Graph-Based Soft Prompting

arXiv:2604.12503v2 Announce Type: replace Abstract: Large Language Models (LLMs) have shown remarkable capabilities across various tasks but remain prone to hallucinations in knowledge-intensive scenarios. Knowledge Base Question Answering (KBQA) mitigates this by grounding generation in Knowledge Graphs (KGs). However, most multi-hop KBQA methods rely on explicit edge traversal, making them fragile to KG incompleteness. In this paper, we proposed a novel graph-based soft prompting framework that shifts the reasoning paradigm from node-level path traversal to subgraph-level reasoning. Specifically, we employ a Graph Neural Network (GNN) to encode extracted structural subgraphs into soft prompts, enabling LLM to reason over richer structural context and identify relevant entities beyond immediate graph neighbors, thereby reducing sensitivity to missing edges. Furthermore, we introduce a two-stage paradigm that reduces computational cost while preserving good performance: a lightweight LLM first leverages the soft prompts to identify question-relevant entities and relations, followed by a more powerful LLM for evidence-aware answer generation. Experiments on four multi-hop KBQA benchmarks show that our approach achieves state-of-the-art performance on three of them, demonstrating its effectiveness. Code is available at the repository: https://github.com/Wangshuaiia/GraSP.

Abstract:Large Language Models (LLMs) have shown remarkable capabilities across various tasks but remain prone to hallucinations in knowledge-intensive scenarios. Knowledge Base Question Answering (KBQA) mitigates this by grounding generation in Knowledge Graphs (KGs). However, most multi-hop KBQA methods rely on explicit edge traversal, making them fragile to KG incompleteness. In this paper, we proposed a novel graph-based soft prompting framework that shifts the reasoning paradigm from node-level path traversal to subgraph-level reasoning. Specifically, we employ a Graph Neural Network (GNN) to encode extracted structural subgraphs into soft prompts, enabling LLM to reason over richer structural context and identify relevant entities beyond immediate graph neighbors, thereby reducing sensitivity to missing edges. Furthermore, we introduce a two-stage paradigm that reduces computational cost while preserving good performance: a lightweight LLM first leverages the soft prompts to identify question-relevant entities and relations, followed by a more powerful LLM for evidence-aware answer generation. Experiments on four multi-hop KBQA benchmarks show that our approach achieves state-of-the-art performance on three of them, demonstrating its effectiveness. Code is available at the repository: this https URL.

Computation and Language (cs.CL); Artificial Intelligence (cs.AI)

arXiv:2604.12503 [cs.CL]

(or arXiv:2604.12503v2 [cs.CL] for this version)

https://doi.org/10.48550/arXiv.2604.12503 Focus to learn more arXiv-issued DOI via DataCite

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Topology-Aware Reasoning over Incomplete Knowledge Graph with Graph-Based Soft Prompting

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