SemPSG: A Semantic Channel-Aware Foundation Model for Polysomnography Analysis

Abstract:Polysomnography (PSG) integrates multiple physiological signals to provide a comprehensive characterization of human sleep, yet its heterogeneous channel configurations across centers pose substantial challenges for transferable representation learning. Existing foundation models mainly focus on physiological modeling or temporal learning, while channel identity is often treated as a fixed structural index, overlooking the physiological semantics encoded by signal modality and reference configuration. To this end, we propose SemPSG, a Semantic channel-aware foundation model for heterogeneous PSG analysis. SemPSG explicitly represents the physiological semantics of channel identity and incorporates them into both signal representation learning and channel aggregation, enabling flexible modeling across diverse data configurations. Specifically, a semantic-conditioned time-series encoder captures signal-specific temporal dynamics and cross-signal interactions, while a multi-view image encoder extracts complementary time-frequency and morphological patterns from the same physiological recordings. We evaluate SemPSG on sleep and health-related tasks, including sleep staging, sleep-disorder breathing analysis, disease prediction, cognition and emotion recognition, and demographic estimation. Extensive experiments demonstrate consistent improvements over both general-purpose time series foundation models and PSG-specific foundation models, together with generalization across heterogeneous datasets across diverse channel configurations.

Machine Learning (cs.LG)

arXiv:2609.36619 [cs.LG]

(or arXiv:2609.36619v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2609.36619 Focus to learn more arXiv-issued DOI via DataCite (pending registration)

arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website.

Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them.

Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.