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This research applies Sylvester normalizing flows within a Bayesian framework to solve spectral overlap and low signal-to-noise challenges in magnetic resonance spectroscopy. By integrating physics-based priors into the generative model, the method achieves accurate metabolite quantification with well-calibrated uncertainty estimates on simulated 7T data. The work represents a significant advancement in leveraging advanced machine learning architectures for high-precision scientific inference in medical imaging.
Physics-Informed Sylvester Normalizing Flows for Bayesian Inference in Magnetic Resonance Spectroscopy
arXiv:2505.03590v2 Announce Type: replace-cross Abstract: Magnetic resonance spectroscopy (MRS) is a non-invasive technique to measure the metabolic composition of tissues, offering valuable insights into neurological disorders, tumor detection, and other metabolic dysfunctions. However, accurate metabolite quantification is hindered by challenges such as spectral overlap, low signal-to-noise ratio, and various artifacts. Traditional methods like linear-combination modeling are susceptible to ambiguities and commonly only provide a theoretical lower bound on estimation accuracy in the form of the Cram\'er-Rao bound. This work introduces a Bayesian inference framework using Sylvester normalizing flows (SNFs) to approximate posterior distributions over metabolite concentrations, enhancing quantification reliability. A physics-based decoder incorporates prior knowledge of MRS signal formation, ensuring realistic distribution representations. We validate the method on simulated 7T proton MRS data, demonstrating accurate metabolite quantification, well-calibrated uncertainties, and insights into parameter correlations and multi-modal distributions.
Abstract:Magnetic resonance spectroscopy (MRS) is a non-invasive technique to measure the metabolic composition of tissues, offering valuable insights into neurological disorders, tumor detection, and other metabolic dysfunctions. However, accurate metabolite quantification is hindered by challenges such as spectral overlap, low signal-to-noise ratio, and various artifacts. Traditional methods like linear-combination modeling are susceptible to ambiguities and commonly only provide a theoretical lower bound on estimation accuracy in the form of the Cramér-Rao bound. This work introduces a Bayesian inference framework using Sylvester normalizing flows (SNFs) to approximate posterior distributions over metabolite concentrations, enhancing quantification reliability. A physics-based decoder incorporates prior knowledge of MRS signal formation, ensuring realistic distribution representations. We validate the method on simulated 7T proton MRS data, demonstrating accurate metabolite quantification, well-calibrated uncertainties, and insights into parameter correlations and multi-modal distributions.
Machine Learning (stat.ML); Machine Learning (cs.LG); Signal Processing (eess.SP); Quantitative Methods (q-bio.QM)
arXiv:2505.03590 [stat.ML]
(or arXiv:2505.03590v2 [stat.ML] for this version)
https://doi.org/10.48550/arXiv.2505.03590 Focus to learn more arXiv-issued DOI via DataCite
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