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This dataset addresses a critical gap in medical imaging by merging spine and pelvic CT scans to resolve anatomical ambiguities at the lumbosacral junction without relying on full-spine counting. By providing annotated records that include ribs and femora, it enables machine learning models to classify vertebrae based on local morphological features rather than global vertebral counts. This advancement supports more accurate surgical planning and automated assessment of complex transitional anatomy in clinical settings.
CTSpinoPelvic1K: spine, pelvis, ribs and femora in one coordinate frame, annotated for lumbosacral transitional anatomy
arXiv:2609.22760v1 Announce Type: cross Abstract: Purpose: A vertebra at the lumbosacral junction is named by counting caudally from C2 on whole-spine imaging, but a lumbar case is planned on lumbar-only imaging (T12 to S1), without C2. Abdominopelvic CT holds that span plus the lowest ribs and pelvis. Where a lumbosacral transitional vertebra (LSTV) alters the count, the local anatomy is ambiguous: four rib-free vertebrae may be an L1 with a lumbar rib or an L5 assimilated to the sacrum, and six may be a sixth lumbar vertebra, a T12 with aplastic ribs, or a lumbarized S1. CTSpinoPelvic1K asks whether local morphology resolves it without the count. CTSpine1K's vertebrae and CTPelvic1K's pelvis covered these patients but were never joined; this release joins them on one series and adds the bones neither had. It provides 802 CT records with per-level ribs and femora, levels anchored on the lowest rib-bearing vertebra and S1, and classes for L6, T13, a separate S1 and lumbar ribs, so anomalies are recorded as such. Acquisition and Validation Methods: Records pair CTSpine1K and CTPelvic1K labels on each patient's bone-richest series under a VerSe-native scheme. Validation covered geometric invariants (802/802 pass), rib-vertebra incidence across 5,749 ribs (0.035% offset), and spinopelvic measures matching published values. Data Format and Usage Notes: NIfTI image/label pairs with patient-grouped LSTV-stratified five-fold splits and a loader; archived at https://doi.org/10.5281/zenodo.22139642. Potential Applications: Classifying a vertebra from local features; updating cadaveric morphometry; spinopelvic assessment; opportunistic screening; and, absent a public preoperative lumbar cohort, surgical planning research (377 records prone). Limitations: thoracic ground truth is field-of-view limited; postural angles supine; no held-out test set; ribs are triaged-review pseudolabels; Castellvi grades two-reader consensus on 33 records.
Abstract:Purpose: A vertebra at the lumbosacral junction is named by counting caudally from C2 on whole-spine imaging, but a lumbar case is planned on lumbar-only imaging (T12 to S1), without C2. Abdominopelvic CT holds that span plus the lowest ribs and pelvis. Where a lumbosacral transitional vertebra (LSTV) alters the count, the local anatomy is ambiguous: four rib-free vertebrae may be an L1 with a lumbar rib or an L5 assimilated to the sacrum, and six may be a sixth lumbar vertebra, a T12 with aplastic ribs, or a lumbarized S1. CTSpinoPelvic1K asks whether local morphology resolves it without the count. CTSpine1K's vertebrae and CTPelvic1K's pelvis covered these patients but were never joined; this release joins them on one series and adds the bones neither had. It provides 802 CT records with per-level ribs and femora, levels anchored on the lowest rib-bearing vertebra and S1, and classes for L6, T13, a separate S1 and lumbar ribs, so anomalies are recorded as such. Acquisition and Validation Methods: Records pair CTSpine1K and CTPelvic1K labels on each patient's bone-richest series under a VerSe-native scheme. Validation covered geometric invariants (802/802 pass), rib-vertebra incidence across 5,749 ribs (0.035% offset), and spinopelvic measures matching published values. Data Format and Usage Notes: NIfTI image/label pairs with patient-grouped LSTV-stratified five-fold splits and a loader; archived at this https URL. Potential Applications: Classifying a vertebra from local features; updating cadaveric morphometry; spinopelvic assessment; opportunistic screening; and, absent a public preoperative lumbar cohort, surgical planning research (377 records prone). Limitations: thoracic ground truth is field-of-view limited; postural angles supine; no held-out test set; ribs are triaged-review pseudolabels; Castellvi grades two-reader consensus on 33 records.
14 pages, 6 figures, 6 tables. Dataset (802 annotated CT records, CC BY-NC-SA 4.0) at this https URL code at this https URL. Submitted to Medical Physics as a Medical Physics Dataset Article
Artificial Intelligence (cs.AI); Machine Learning (cs.LG)
arXiv:2609.22760 [cs.AI]
(or arXiv:2609.22760v1 [cs.AI] for this version)
https://doi.org/10.48550/arXiv.2609.22760 arXiv-issued DOI via DataCite (pending registration)
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